RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NUDCD3Q8IVD9 361 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 PPWD1Q96BP3 646 aaKnown RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 SENP5Q96HI0 755 aaPredicted RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 METTL2AQ96IZ6 378 aaKnown RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 TRIM4Q9C037 500 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 ABI3Q9P2A4 366 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 DNAJC15Q9Y5T4 150 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 SPENQ96T58 3664 aaKnown RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 GCN1Q92616 2671 aaKnown RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 TRAV17A0A0B4J275 112 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 PCDH7O60245 1069 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 RSL1D1O76021 490 aaKnown RBP17.88■□□□□ 0.45
RTN4-207ENST00000402434 ZFAND5O76080 213 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 IGKV3-11P04433 115 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 PRPH2P23942 346 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 TIA1P31483 386 aaKnown RBP eCLIP17.88■□□□□ 0.454e-8■■■□□ 16.3
RTN4-207ENST00000402434 FOXK1P85037 733 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 SPDYAQ5MJ70 313 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 DGAT2L6Q6ZPD8 337 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 CLYBLQ8N0X4 340 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 OR4K14Q8NGD5 310 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 OR8K3Q8NH51 312 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 FAM76AQ8TAV0 307 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 CPT1CQ8TCG5 803 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 SLC2A12Q8TD20 617 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 ZNF721Q8TF20 911 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 MIB2Q96AX9 1013 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 OR8D2Q9GZM6 311 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 TUBB1Q9H4B7 451 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 TRAF6Q9Y4K3 522 aa17.88■□□□□ 0.45
RTN4-207ENST00000402434 TMEM200CA6NKL6 621 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 F10P00742 488 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 PIK3R1P27986 724 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 CD96P40200 585 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 GSTM5P46439 218 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 BTKQ06187 659 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 TUBA3CQ13748 450 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 IMPG1Q17R60 797 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 SPRED3Q2MJR0 410 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 TUBA3EQ6PEY2 450 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 HSDL2Q6YN16 418 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 Q6ZSR9 355 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 MMP21Q8N119 569 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 SNRNP40Q96DI7 357 aaKnown RBP17.87■□□□□ 0.45
RTN4-207ENST00000402434 FBXL20Q96IG2 436 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 PKNOX2Q96KN3 472 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 BARD1Q99728 777 aaKnown RBP17.87■□□□□ 0.45
RTN4-207ENST00000402434 UTP23Q9BRU9 249 aaKnown RBP17.87■□□□□ 0.45
RTN4-207ENST00000402434 FAIM2Q9BWQ8 316 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 TRIM45Q9H8W5 580 aaPredicted RBP17.87■□□□□ 0.45
RTN4-207ENST00000402434 TMBIM4Q9HC24 238 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 KCNK9Q9NPC2 374 aa17.87■□□□□ 0.45
RTN4-207ENST00000402434 SHANK1Q9Y566 2161 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 MYO18BQ8IUG5 2567 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 GNG14A0A1W2PPG7 69 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 A0A1W2PS29 197 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 GABRR3A8MPY1 467 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 DYRK3O43781 588 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PRKNO60260 465 aaPredicted RBP17.86■□□□□ 0.45
RTN4-207ENST00000402434 CHEK2O96017 543 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 DRD2P14416 443 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 TRHRP34981 398 aaPredicted RBP17.86■□□□□ 0.45
RTN4-207ENST00000402434 XKP51811 444 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 SLC18A1P54219 525 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 KIAA0040Q15053 153 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 IGFBP7Q16270 282 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PRR30Q53SZ7 412 aaPredicted RBP17.86■□□□□ 0.45
RTN4-207ENST00000402434 CES4AQ5XG92 561 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 ZNF321PQ8N8H1 164 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.86■□□□□ 0.453e-47■□□□□ 9.6
RTN4-207ENST00000402434 RIT1Q92963 219 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 TLCD1Q96CP7 247 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.86■□□□□ 0.455e-12■■□□□ 11.4
RTN4-207ENST00000402434 COPS7AQ9UBW8 275 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PSME2Q9UL46 239 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 DLGAP4Q9Y2H0 992 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PCDHGB6Q9Y5F9 930 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 PTGDR2Q9Y5Y4 395 aa17.86■□□□□ 0.45
RTN4-207ENST00000402434 GOLGA6L10A6NI86 522 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 TMEM233B4DJY2 109 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 SLC28A1O00337 649 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 OR10H2O60403 315 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 SERPINE1P05121 402 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 ANXA4P09525 319 aaPredicted RBP17.85■□□□□ 0.45
RTN4-207ENST00000402434 RNF4P78317 190 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 ZNF468Q5VIY5 522 aaPredicted RBP17.85■□□□□ 0.45
RTN4-207ENST00000402434 CISD2Q8N5K1 135 aaKnown RBP17.85■□□□□ 0.45
RTN4-207ENST00000402434 MDS2Q8NDY4 140 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 C16orf78Q8WTQ4 265 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 THAP3Q8WTV1 239 aaPredicted RBP17.85■□□□□ 0.45
RTN4-207ENST00000402434 ART5Q96L15 291 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 CXorf21Q9HAI6 301 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 ANKRD10Q9NXR5 420 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 MYOTQ9UBF9 498 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 HEY2Q9UBP5 337 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 FIS1Q9Y3D6 152 aa17.85■□□□□ 0.45
RTN4-207ENST00000402434 WDR91A4D1P6 747 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 HRKO00198 91 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 FCHO1O14526 889 aa17.84■□□□□ 0.45
RTN4-207ENST00000402434 RGS14O43566 566 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms