RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GFM2Q969S9 779 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MARK4Q96L34 752 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TEX37Q96LM6 180 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FAIM2Q9BWQ8 316 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ALOXE3Q9BYJ1 711 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TRIM55Q9BYV6 548 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 WDR41Q9HAD4 459 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLAMF7Q9NQ25 335 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NOP53Q9NZM5 478 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 POLHQ9Y253 713 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KCNMB2Q9Y691 235 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EPG5Q9HCE0 2579 aa11.61□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CROCCQ5TZA2 2017 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DOCK10Q96BY6 2186 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SAGE2PA6NJ88 616 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ARGFXA6NJG6 315 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 A8MUA0 341 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 HRKO00198 91 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PCDH17O14917 1159 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TBX19O60806 448 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DDAH2O95865 285 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 HPP00738 406 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CT62P0C5K7 136 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MAPK1P28482 360 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IL12AP29459 219 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 STT3AP46977 705 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GPR143P51810 404 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SEC24CP53992 1094 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 C21orf58P58505 322 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 STX4Q12846 297 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SF3A3Q12874 501 aaKnown RBP eCLIP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MAD2L1Q13257 205 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SERTAD2Q14140 314 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CEBPEQ15744 281 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 COL28A1Q2UY09 1125 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DCAF10Q5QP82 559 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PAPD4Q6PIY7 484 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZSCAN1Q8NBB4 408 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OR4K14Q8NGD5 310 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CEP70Q8NHQ1 597 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SUN3Q8TAQ9 357 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PTPMT1Q8WUK0 201 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 METTL21AQ8WXB1 218 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PPWD1Q96BP3 646 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KLHL29Q96CT2 875 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF764Q96H86 408 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 BRINP2Q9C0B6 783 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 REEP4Q9H6H4 257 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ADAP2Q9NPF8 381 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TCF7L2Q9NQB0 619 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TAS2R7Q9NYW3 318 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DCTN4Q9UJW0 460 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF223Q9UK11 482 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 UTS2RQ9UKP6 389 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PPIEQ9UNP9 301 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EIF3LQ9Y262 564 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MAN2B2Q9Y2E5 1009 aa11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 WBP11Q9Y2W2 641 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 E9PBE3 544 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SCAMP2O15127 329 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 KLHL41O60662 606 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ERAL1O75616 437 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DNAJB5O75953 348 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CLPSP04118 112 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLC35E2P0CK97 266 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CPMP14384 443 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DRD4P21917 467 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PIK3R1P27986 724 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FEN1P39748 380 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ASMTP46597 345 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZFP36L2P47974 494 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 XKP51811 444 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CLDN8P56748 225 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLC26A5P58743 744 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GNGT1P63211 74 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MGAT2Q10469 447 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ELAVL1Q15717 326 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LTB4RQ15722 352 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TBR1Q16650 682 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NXNQ6DKJ4 435 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 NDUFAF7Q7L592 441 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SPATA19Q7Z5L4 167 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ST13P4Q8IZP2 240 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 APCDD1LQ8NCL9 501 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OR7A2PQ8NGA2 310 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CHMP6Q96FZ7 201 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IP6K3Q96PC2 410 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CCDC28BQ9BUN5 200 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TMEM120AQ9BXJ8 343 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF385DQ9H6B1 395 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLC35C2Q9NQQ7 365 aa11.59□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PNO1Q9NRX1 252 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms