RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NUS1Q96E22 293 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 TMEM80Q96HE8 168 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 LINC00615Q96LM1 132 aaPredicted RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 C3orf14Q9HBI5 128 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 EXOSC4Q9NPD3 245 aaKnown RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 ERVK13-1Q9NX77 482 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 AHSPQ9NZD4 102 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 CCDC88CQ9P219 2028 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 PLXND1Q9Y4D7 1925 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 RTCAO00442 366 aaKnown RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 OR10H3O60404 316 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 APOA1P02647 267 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 TNFSF8P32971 234 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 GPR1P46091 355 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 MAPK12P53778 367 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 MANFP55145 182 aaKnown RBP24.28■■□□□ 1.48
COL13A1-203ENST00000398969 NTHL1P78549 312 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 SLC34A3Q8N130 599 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 PPP1R16AQ96I34 528 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 DHRS1Q96LJ7 313 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 ACAT2Q9BWD1 397 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 DPEP2Q9H4A9 486 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 HCFC2Q9Y5Z7 792 aa24.28■■□□□ 1.48
COL13A1-203ENST00000398969 FAAHO00519 579 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 PAPLNO95428 1278 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 ENDOUP21128 410 aaKnown RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 RPS19P39019 145 aaKnown RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 RBM45Q8IUH3 476 aaKnown RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 FLCNQ8NFG4 579 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 TM4SF18Q96CE8 201 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 DYRK4Q9NR20 520 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 TRAPPC4Q9Y296 219 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 LRRK1Q38SD2 2015 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 C17orf113A0A1B0GUU1 675 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 PDPK1O15530 556 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 B4GALT2O60909 372 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 RB1P06400 928 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 H1F0P07305 194 aaKnown RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 TIE1P35590 1138 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 XKP51811 444 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 SPHARQ15513 63 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 KHDRBS2Q5VWX1 349 aaKnown RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 DEF8Q6ZN54 512 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 FAM83HQ6ZRV2 1179 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 KRT73Q86Y46 540 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 VANGL1Q8TAA9 524 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-203ENST00000398969 SLC6A18Q96N87 628 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 BARHL1Q9BZE3 327 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 ASF1AQ9Y294 204 aa24.27■■□□□ 1.48
COL13A1-203ENST00000398969 H3BN98 237 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 HNRNPA1P09651 372 aaKnown RBP eCLIP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 NCF4Q15080 339 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF697Q5TEC3 545 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 PGBD2Q6P3X8 592 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 C6orf120Q7Z4R8 191 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 CACTIN-AS1Q8N1I8 211 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 OR4D11Q8NGI4 311 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 OR2L2Q8NH16 312 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 MTIF3Q9H2K0 278 aaKnown RBP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 TBX19O60806 448 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 MMP20O60882 483 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 PDE9AO76083 593 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 SLITRK5O94991 958 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 NKX2-5P52952 324 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 HSPB3Q12988 150 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 CASP12Q6UXS9 341 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 GDPGP1Q6ZNW5 385 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 ST13P5Q8NFI4 369 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 OR5AR1Q8NGP9 310 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF514Q96K75 400 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 F2RL3Q96RI0 385 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 WFDC6Q9BQY6 131 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 OR52A5Q9H2C5 316 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 SIAEQ9HAT2 523 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 NEUROD4Q9HD90 331 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 SIRT3Q9NTG7 399 aaPredicted RBP24.26■■□□□ 1.47
COL13A1-203ENST00000398969 C5AR2Q9P296 337 aa24.26■■□□□ 1.47
COL13A1-203ENST00000398969 H3BQ06 376 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-203ENST00000398969 HMGN4O00479 90 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 SEMA3DO95025 777 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 BSGP35613 385 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 KCNJ5P48544 419 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 VASPP50552 380 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF91Q05481 1191 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 TMC5Q6UXY8 1006 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 GRASPQ7Z6J2 395 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-203ENST00000398969 RAD51AP1Q96B01 352 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF354BQ96LW1 612 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 ZSWIM3Q96MP5 696 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 MND1Q9BWT6 205 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 RACGAP1Q9H0H5 632 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 POLR2J3Q9H1A7 115 aaKnown RBP24.25■■□□□ 1.47
COL13A1-203ENST00000398969 RHBGQ9H310 441 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 SEC14L4Q9UDX3 406 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 TBC1D24Q9ULP9 559 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 RPL36Q9Y3U8 105 aaKnown RBP24.25■■□□□ 1.47
COL13A1-203ENST00000398969 SNX11Q9Y5W9 270 aa24.25■■□□□ 1.47
COL13A1-203ENST00000398969 SH3BP5O60239 455 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 CRYBB2P43320 205 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 AGAP6Q5VW22 663 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms