RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 INMT-MINDY4F8WBC2 141 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 LYRM1O43325 122 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 MSL3P1P0C860 447 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 ENPP1P22413 925 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 CSTF1Q05048 431 aaKnown RBP9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 FGFBP1Q14512 234 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 TAF12Q16514 161 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 CCSMST1Q4G0I0 132 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 ESCO2Q56NI9 601 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 BCL2L15Q5TBC7 163 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 ALG1LQ6GMV1 187 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 ANKRD54Q6NXT1 300 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 NCEH1Q6PIU2 408 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 GLB1LQ6UWU2 654 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 GLRX5Q86SX6 157 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 IQCF2Q8IXL9 164 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 FAM9CQ8IZT9 166 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 PIP5K1AQ99755 562 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 TAPBPLQ9BX59 468 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 C1QTNF6Q9BXI9 259 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 POLR2J3Q9H1A7 115 aaKnown RBP9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 FAM120CQ9NX05 1096 aaKnown RBP9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 PLEKHB1Q9UF11 243 aaPredicted RBP9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC9A8Q9Y2E8 581 aa9.41□□□□□ -0.9
PTCHD4-202ENST00000398738 CCDC88CQ9P219 2028 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 GTPBP1O00178 669 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 CD160O95971 181 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 IFNW1P05000 195 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 GSTM1P09488 218 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 PRKAR1AP10644 381 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 HOXB6P17509 224 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 MYL12AP19105 171 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 ETV5P41161 510 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 ETV1P50549 477 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 XKP51811 444 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 PURAQ00577 322 aaKnown RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 MAB21L1Q13394 359 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 GLYR1Q49A26 553 aaPredicted RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 CDONQ4KMG0 1287 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 FAAH2Q6GMR7 532 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 LAMTOR1Q6IAA8 161 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 RSPO2Q6UXX9 243 aaPredicted RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 USP45Q70EL2 814 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC25A46Q96AG3 418 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 REPS1Q96D71 796 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 KCTD7Q96MP8 289 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 SAMD11Q96NU1 681 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 OR51B5Q9H339 312 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 B3GAT2Q9NPZ5 323 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 KCTD5Q9NXV2 234 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 ASIC5Q9NY37 505 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 MGAT4AQ9UM21 535 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 MAPRE3Q9UPY8 281 aa9.4□□□□□ -0.9
PTCHD4-202ENST00000398738 A0A0U1RQF3 1178 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 ANKDD1BA6NHY2 528 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 SCAMP2O15127 329 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 CLDN11O75508 207 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 OR7A10O76100 309 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 CH25HO95992 272 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 ARSBP15848 533 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 PTGER1P34995 402 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 CD79BP40259 229 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 LIMK1P53667 647 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 RPS13P62277 151 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 RBBP4Q09028 425 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 GRB14Q14449 540 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 SEC23BQ15437 767 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 TOR1AIP1Q5JTV8 583 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 MZT2BQ6NZ67 158 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 MTFR2Q6P444 385 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 NXPE1Q8N323 547 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 TMEM145Q8NBT3 493 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 OR4C15Q8NGM1 316 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 LRR1Q96L50 414 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 MAGEB10Q96LZ2 347 aaPredicted RBP9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 MND1Q9BWT6 205 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 GPR62Q9BZJ7 368 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 POLHQ9Y253 713 aa9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 MRPS7Q9Y2R9 242 aaKnown RBP9.4□□□□□ -0.91
PTCHD4-202ENST00000398738 LOC105369274A0A096LPK9 316 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 HYKKA2RU49 373 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 C5orf58C9J3I9 102 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 H3BNC9 293 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PRRG1O14668 218 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 ALPPP05187 535 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 SOX18P35713 384 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 MTAPQ13126 283 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 NCF4Q15080 339 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 FCN2Q15485 313 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 CLEC12AQ5QGZ9 265 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 MLIPQ5VWP3 458 aa9.39□□□□□ -0.91
PTCHD4-202ENST00000398738 PRSS55Q6UWB4 352 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms