RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR2L2Q8NH16 312 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 USB1Q9BQ65 265 aaKnown RBP13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 HPF1Q9NWY4 346 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 KANTRA0A1W2PQU2 76 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 KDM4BO94953 1096 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 S100A1P23297 94 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 ARL3P36405 182 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC9A3P48764 834 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 OR14L1PQ8NHC6 308 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 GPR22Q99680 433 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM165Q9HC07 324 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 MYH6P13533 1939 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 AQP12BA6NM10 295 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 DSC1Q08554 894 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF763Q0D2J5 394 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 AQP12AQ8IXF9 295 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 RAB2BQ8WUD1 216 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 MCHR1Q99705 422 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 DUSP23Q9BVJ7 150 aa13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 NKX1-2Q9UD57 310 aaPredicted RBP13.64□□□□□ -0.23
PCDHA11-201ENST00000398640 GNG2P59768 71 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM189BP81408 668 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF678Q5SXM1 525 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM86B1Q8N7N1 296 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 C2CD4AQ8NCU7 369 aaPredicted RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 DAZLQ92904 295 aaKnown RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 KIAA1191Q96A73 305 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 GSKIPQ9P0R6 139 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PCDHGA2Q9Y5H1 932 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ATF6P18850 670 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 SOX2P48431 317 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 DCP2Q8IU60 420 aaKnown RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC15A3Q8IY34 581 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 FAM120CQ9NX05 1096 aaKnown RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 METTL21EPA6NDL7 271 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PLATP00750 562 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 MAGEA12P43365 314 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC25A25Q6KCM7 469 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM107Q6UX40 140 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 DPH7Q9BTV6 452 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ITPAQ9BY32 194 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF700Q9H0M5 742 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 MED11Q9P086 117 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 FXYD6-FXYD2A0A087WZ82 144 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PDYNP01213 254 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 HOXD8P13378 290 aaPredicted RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ACRV1P26436 265 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 NSDHLQ15738 373 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 CNPY1Q3B7I2 92 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ABHD17BQ5VST6 288 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PQLC3Q8N755 202 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM234Q8WY98 164 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 TSGA13Q96PP4 275 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 FXYD6Q9H0Q3 95 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 NLGN3Q9NZ94 848 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 TMEM59LQ9UK28 342 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 UQCRC1P31930 480 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 AFF1P51825 1210 aaKnown RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PLEKHS1Q5SXH7 462 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 KRTCAP2Q8N6L1 136 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ZBTB8BQ8NAP8 495 aaPredicted RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 RLN3Q8WXF3 142 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 BIRC7Q96CA5 298 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 PKP2Q99959 881 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 ZNF471Q9BX82 626 aaPredicted RBP13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 MVB12BQ9H7P6 319 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
PCDHA11-201ENST00000398640 CXCL10P02778 98 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 HOXA9P31269 272 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 OR4C15Q8NGM1 316 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 DDX1Q92499 740 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 NSMAFQ92636 917 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 REEP4Q9H6H4 257 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PTGDR2Q9Y5Y4 395 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 TEX264Q9Y6I9 313 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 LHCGRP22888 699 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 CFL1P23528 166 aaKnown RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 FOLR3P41439 243 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PM20D1Q6GTS8 502 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 Q6ZSR6 202 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 GNPDA2Q8TDQ7 276 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 TAMM41Q96BW9 452 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PCDHGB2Q9Y5G2 931 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 A8MVJ9 347 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 CSTAP01040 98 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 HERV-K104P61576 105 aa13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 PITX1P78337 314 aaPredicted RBP13.62□□□□□ -0.23
PCDHA11-201ENST00000398640 SHISA6Q6ZSJ9 500 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms