RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TPI1P60174 286 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 KLHL22Q53GT1 634 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PIGGQ5H8A4 983 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 NANOGP8Q6NSW7 305 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM81Q6P7N7 255 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF767PQ75MW2 155 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 DEFB106AQ8N104 65 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM181AQ8N9Y4 354 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PDPRQ8NCN5 879 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 OR52E1Q8NGJ3 308 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MRGPRDQ8TDS7 321 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 EDARADDQ8WWZ3 215 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 OIT3Q8WWZ8 545 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 HSD17B8Q92506 261 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 DIO2Q92813 273 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 R3HDM4Q96D70 268 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MGME1Q9BQP7 344 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM246Q9BRR3 403 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 OSBPL11Q9BXB4 747 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SLC2A11Q9BYW1 496 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 DNTTIP1Q9H147 329 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RGCCQ9H4X1 137 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 WDR55Q9H6Y2 383 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CCNB1IP1Q9NPC3 277 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MTMR10Q9NXD2 777 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TREM2Q9NZC2 230 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 WNT16Q9UBV4 365 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CDC14AQ9UNH5 594 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PIPSLA2A3N6 862 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 LEUTXA8MZ59 168 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CDC7O00311 574 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CCSO14618 274 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PSKH1P11801 424 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF7P17097 686 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 COL9A1P20849 921 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 CSKP41240 450 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 NUMBP49757 651 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RBX1P62877 108 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ERVK-25P63136 954 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 IL18R1Q13478 541 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RCAN2Q14206 197 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SNAPC1Q16533 368 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 UGT3A2Q3SY77 523 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 GADL1Q6ZQY3 521 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 USP45Q70EL2 814 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RD3Q7Z3Z2 195 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF410Q86VK4 478 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF113BQ8IZP6 322 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM104Q8NE00 496 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 STEAP2Q8NFT2 490 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 NEK7Q8TDX7 302 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 DVL3Q92997 716 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PPWD1Q96BP3 646 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF125Q96EQ8 232 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 C11orf84Q9BUA3 381 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ERVK-6Q9BXR3 956 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RHOJQ9H4E5 214 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 EML4Q9HC35 981 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ENTPD7Q9NQZ7 604 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 MAGEL2Q9UJ55 1249 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PACSIN3Q9UKS6 424 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PCDHGC4Q9Y5F7 938 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 EVPLQ92817 2033 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 OR6C76A6NM76 312 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 G3V2L1 256 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 M0QYT0 321 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 KCNK1O00180 336 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 STX7O15400 261 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 B4GALT2O60909 372 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SCGB2A1O75556 95 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SRP72O76094 671 aaKnown RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 VAPBO95292 243 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ANGPTL1O95841 491 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TFAP2AP05549 437 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SMIM18P0DKX4 95 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 DRD5P21918 477 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 UGT2B10P36537 528 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 PNPLA4P41247 253 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RGS8P57771 180 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SIGLEC14Q08ET2 396 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 STX4Q12846 297 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 NME3Q13232 169 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SOWAHAQ2M3V2 549 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ARL13AQ5H913 290 aaPredicted RBP6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SPESP1Q6UW49 350 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SPATA19Q7Z5L4 167 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ADGRD2Q7Z7M1 963 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TMEM135Q86UB9 458 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ZNF573Q86YE8 665 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 ZDHHC13Q8IUH4 622 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 FAM89BQ8N5H3 189 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 OR10H4Q8NGA5 316 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SHKBP1Q8TBC3 707 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 TOP1MTQ969P6 601 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SLAMF9Q96A28 289 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 RNF208Q9H0X6 261 aa6.29□□□□□ -1.4
TM9SF4-202ENST00000398022 SMURF1Q9HCE7 757 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms