RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZNF578Q96N58 590 aaPredicted RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 GBP5Q96PP8 586 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 GPATCH1Q9BRR8 931 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 INPP5KQ9BT40 448 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 IL1RL2Q9HB29 575 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF304Q9HCX3 659 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 GID8Q9NWU2 228 aa15.94■□□□□ 0.14
TSPAN4-205ENST00000397406 A0A096LPI6 279 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 TRBV5-3A0A0A0MS03 114 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 KCNH1O95259 989 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 HBQ1P09105 142 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 ITIH1P19827 911 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 ETV5P41161 510 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 TRPC1P48995 793 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 LRRC74AQ0VAA2 488 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 CEBPEQ15744 281 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 DNAL1Q4LDG9 190 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 C6orf10Q5SRN2 563 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 C1orf189Q5VU69 101 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF385CQ66K41 422 aaPredicted RBP15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 PCSK4Q6UW60 755 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 C16orf89Q6UX73 402 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 RAB11FIP2Q7L804 512 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 DEFB107AQ8IZN7 70 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 KIF2BQ8N4N8 673 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 VPS37AQ8NEZ2 397 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 DNAJB8Q8NHS0 232 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 PMEPA1Q969W9 287 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 RNF31Q96EP0 1072 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF681Q96N22 645 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC39A3Q9BRY0 314 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 CADM1Q9BY67 442 aaKnown RBP15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC7A5P2Q9GIP4 190 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC6A13Q9NSD5 602 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 NDE1Q9NXR1 346 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC39A1Q9NY26 324 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 CROTQ9UKG9 612 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 PCDHGA8Q9Y5G5 932 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 PCDHGA7Q9Y5G6 932 aa15.93■□□□□ 0.14
TSPAN4-205ENST00000397406 PTPRQQ9UMZ3 2332 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 CCDC187A0A096LP49 1063 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 A0A1W2PRB8 838 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 A0A1W2PS29 197 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 MYO1GB0I1T2 1018 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 ANKRD65E5RJM6 399 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 RFXANKO14593 260 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 GSC2O15499 205 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 ERN1O75460 977 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 ERAL1O75616 437 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 NTRK1P04629 796 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 FBLP22087 321 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 PSME3P61289 254 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 DUSP2Q05923 314 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 CAPRIN1Q14444 709 aaKnown RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 MED25Q71SY5 747 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 COX15Q7KZN9 410 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 MSRB3Q8IXL7 192 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 GOT1L1Q8NHS2 421 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 SUN3Q8TAQ9 357 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 TANKQ92844 425 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 CLIP3Q96DZ5 547 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 PANX1Q96RD7 426 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 RBCK1Q9BYM8 510 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC22A11Q9NSA0 550 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 ACSS1Q9NUB1 689 aaPredicted RBP15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 SLC25A37Q9NYZ2 338 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 VAPAQ9P0L0 249 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 PSME2Q9UL46 239 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 MAP4K5Q9Y4K4 846 aa15.92■□□□□ 0.14
TSPAN4-205ENST00000397406 MGAQ8IWI9 3026 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 CCDC88CQ9P219 2028 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 BLACEA4D250 179 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 FGF17O60258 216 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 DNAJC8O75937 253 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 CPSF4O95639 269 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 C6orf47O95873 294 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ONECUT2O95948 504 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF28P17035 718 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 RORAP35398 523 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 XCR1P46094 333 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 HBA1P69905 142 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 EIF3IQ13347 325 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 MLC1Q15049 377 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF750Q32MQ0 723 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 GTDC1Q4AE62 458 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 CEACAM20Q6UY09 585 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 DNAJC14Q6Y2X3 702 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ZNF595Q8IYB9 648 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 OR4K14Q8NGD5 310 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 OR5P2Q8WZ92 322 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 COL26A1Q96A83 441 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ANKRD9Q96BM1 317 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 TBC1D20Q96BZ9 403 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 ZBED6CLQ96FA7 236 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 AMDHD1Q96NU7 426 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 OR1F2PQ96R84 312 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 CGREF1Q99674 301 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 HOPXQ9BPY8 73 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 TRIM4Q9C037 500 aa15.91■□□□□ 0.14
TSPAN4-205ENST00000397406 GLIPR2Q9H4G4 154 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms