RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 SVOPQ8N4V2 548 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 MACROD1Q9BQ69 325 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 CACYBPQ9HB71 228 aaKnown RBP15.28■□□□□ 0.04
SNX6-202ENST00000396526 POT1Q9NUX5 634 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 SLC13A4Q9UKG4 626 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 KLHL20Q9Y2M5 609 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 KIR2DS5A0A0G2JLQ3 304 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 A0A0G2JNG1 304 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 GLOD5A6NK44 160 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 KIR2DS3K7RE56 304 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 BTN3A3O00478 584 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 PPM1DO15297 605 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 B4GAT1O43505 415 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 FHP07954 510 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 TFPTP0C1Z6 253 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 KIR2DS5Q14953 304 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 IQCCQ4KMZ1 466 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 ARMC6Q6NXE6 501 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 AMER3Q8N944 861 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 ISOC1Q96CN7 298 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 COL21A1Q96P44 957 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 OR51I1Q9H343 314 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 SIRT3Q9NTG7 399 aaPredicted RBP15.28■□□□□ 0.04
SNX6-202ENST00000396526 NDRG4Q9ULP0 352 aaKnown RBP15.28■□□□□ 0.04
SNX6-202ENST00000396526 ATG4BQ9Y4P1 393 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 FAM221BA6H8Z2 402 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 C2orf74A8MZ97 194 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 CPNE6O95741 557 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 NR2F6P10588 404 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 TNFRSF1BP20333 461 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 SLC48A1Q6P1K1 146 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 CCDC116Q8IYX3 515 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 TIMMDC1Q9NPL8 285 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 MS4A12Q9NXJ0 267 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 SLC9A8Q9Y2E8 581 aa15.28■□□□□ 0.04
SNX6-202ENST00000396526 A0A1W2PR48 441 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 OR12D1P0DN82 309 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 POLR2CP19387 275 aaPredicted RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 CERS1P27544 350 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 CALRP27797 417 aaKnown RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 SLC5A2P31639 672 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 XCR1P46094 333 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 FIGLAQ6QHK4 219 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 TAF8Q7Z7C8 310 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 SPARTQ8N0X7 666 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 BBS10Q8TAM1 723 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 FAM174AQ8TBP5 190 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 ACTR10Q9NZ32 417 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 CALML5Q9NZT1 146 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 KLF15Q9UIH9 416 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 OR6C74A6NCV1 312 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 MRPS14O60783 128 aaKnown RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 FAM20BO75063 409 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 AIFM1O95831 613 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 EML2O95834 649 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 CLK3P49761 638 aaKnown RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 CTU2Q2VPK5 515 aaKnown RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 PROX2Q3B8N5 592 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 TMEM31Q5JXX7 168 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 COLEC12Q5KU26 742 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 IPCEF1Q8WWN9 437 aaPredicted RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 IMPAD1Q9NX62 359 aa15.27■□□□□ 0.04
SNX6-202ENST00000396526 USP36Q9P275 1121 aaKnown RBP15.27■□□□□ 0.04
SNX6-202ENST00000396526 HMGN4O00479 90 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 EMC8O43402 210 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 B3GALT2O43825 422 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 MAGP20916 626 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 CPN2P22792 545 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 IFNA8P32881 189 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 ABHD13Q7L211 337 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 ABI3BPQ7Z7G0 1075 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 SLC5A8Q8N695 610 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 ZNF540Q8NDQ6 660 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 CNIH3Q8TBE1 160 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 NT5CQ8TCD5 201 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 RORBQ92753 470 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 TOE1Q96GM8 510 aaKnown RBP15.27■□□□□ 0.03
SNX6-202ENST00000396526 LTB4R2Q9NPC1 389 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 CYP8B1Q9UNU6 501 aa15.27■□□□□ 0.03
SNX6-202ENST00000396526 A0A0J9YVX5 310 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 AGXTP21549 392 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 CD72P21854 359 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 HYAL2Q12891 473 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 COL19A1Q14993 1142 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 OR13H1Q8NG92 308 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 C12orf43Q96C57 262 aaKnown RBP15.26■□□□□ 0.03
SNX6-202ENST00000396526 HRASLS5Q96KN8 279 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 ALPK1Q96QP1 1244 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 SERINC2Q96SA4 455 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 GABARAPL3Q9BY60 117 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 CD93Q9NPY3 652 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 CPNE7Q9UBL6 633 aa15.26■□□□□ 0.03
SNX6-202ENST00000396526 APOBEC3BQ9UH17 382 aaKnown RBP15.26■□□□□ 0.03
SNX6-202ENST00000396526 OR2A25A4D2G3 310 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms