RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SLC48A1Q6P1K1 146 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 APCDD1LQ8NCL9 501 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 ELP5Q8TE02 316 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 NPAS2Q99743 824 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 FAIM2Q9BWQ8 316 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 MFRPQ9BY79 579 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 MANSC1Q9H8J5 431 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 CLCA3PQ9Y6N3 262 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 TNRC6AQ8NDV7 1962 aaKnown RBP18.58■□□□□ 0.57
SNCA-203ENST00000394986 CFAP46Q8IYW2 2715 aa18.58■□□□□ 0.56
SNCA-203ENST00000394986 TRBV11-1A0A0K0K1C0 115 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 HRKO00198 91 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 ERAL1O75616 437 aaKnown RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 PIK3R1P27986 724 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 PTGER1P34995 402 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 RPL14P50914 215 aaKnown RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 PLIN5Q00G26 463 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 TERF2Q15554 542 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 CRB2Q5IJ48 1285 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 ISLR2Q6UXK2 745 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 TMEM132CQ8N3T6 1108 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 ZNF843Q8N446 348 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 OR14A16Q8NHC5 309 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 KLHL29Q96CT2 875 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 C19orf60Q96EN9 201 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 OR8D2Q9GZM6 311 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 PCDHGB7Q9Y5F8 929 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 CSAG2Q9Y5P2 127 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 OR10H2O60403 315 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 PEX11AO75192 247 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 SNNO75324 88 aaPredicted RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 DDAH2O95865 285 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 F10P00742 488 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 FEN1P39748 380 aaKnown RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 GPR143P51810 404 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 XKP51811 444 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 AP2B1P63010 937 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 PPP2R2AP63151 447 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 DUSP2Q05923 314 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 CRLF3Q8IUI8 442 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 ST13P4Q8IZP2 240 aaPredicted RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 RBMXL3Q8N7X1 1067 aaKnown RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 OR4K14Q8NGD5 310 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 FAM76AQ8TAV0 307 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 SLC2A12Q8TD20 617 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 THAP3Q8WTV1 239 aaPredicted RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 DAZLQ92904 295 aaKnown RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 EGLN2Q96KS0 407 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 FCRL1Q96LA6 429 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 ACBD3Q9H3P7 528 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 PLA2G3Q9NZ20 509 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 MARCOQ9UEW3 520 aaPredicted RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 HAO1Q9UJM8 370 aa18.57■□□□□ 0.56
SNCA-203ENST00000394986 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.57■□□□□ 0.56
SNCA-203ENST00000394986 SYNDIG1LA6NDD5 238 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 PRKNO60260 465 aaPredicted RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 KLHL41O60662 606 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 CPMP14384 443 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 COX7A2P14406 83 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 SDC1P18827 310 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 C2orf80Q0P641 193 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 MFAP5Q13361 173 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 PRSS53Q2L4Q9 553 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 NADK2Q4G0N4 442 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 ATG16L1Q676U5 607 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 FAM71E1Q6IPT2 247 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 H3F3CQ6NXT2 135 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 TRIM42Q8IWZ5 723 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 CLHC1Q8NHS4 586 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNCA-203ENST00000394986 RAB3IL1Q8TBN0 382 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 ZNF75CPQ92670 426 aaPredicted RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 EXOSC8Q96B26 276 aaKnown RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 CNRIP1Q96F85 164 aaPredicted RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 VMP1Q96GC9 406 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 RBM18Q96H35 190 aaKnown RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 C1orf50Q9BV19 199 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 MYNNQ9NPC7 610 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 THAP1Q9NVV9 213 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 LUZP4Q9P127 313 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 UTS2RQ9UKP6 389 aa18.56■□□□□ 0.56
SNCA-203ENST00000394986 PPIEQ9UNP9 301 aaKnown RBP18.56■□□□□ 0.56
SNCA-203ENST00000394986 SPTA1P02549 2419 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 SNUPNO95149 360 aaKnown RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 SLC35E2P0CK97 266 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 CLCN2P51788 898 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 HK2P52789 917 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 OCRLQ01968 901 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 ZNF267Q14586 743 aaPredicted RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 HEPACAMQ14CZ8 416 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 IGFL2Q6UWQ7 119 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 TEX19Q8NA77 164 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 MORN4Q8NDC4 146 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 GFM2Q969S9 779 aaKnown RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 TUBGCP3Q96CW5 907 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 METTL2AQ96IZ6 378 aaKnown RBP18.55■□□□□ 0.56
SNCA-203ENST00000394986 PPP3R2Q96LZ3 170 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 TSSK3Q96PN8 268 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 CNPPD1Q9BV87 410 aa18.55■□□□□ 0.56
SNCA-203ENST00000394986 DEFB126Q9BYW3 111 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms