RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ZNF473Q8WTR7 871 aaKnown RBP19.42■□□□□ 0.7
TRAF4-203ENST00000394925 MBD6Q96DN6 1003 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 RBM18Q96H35 190 aaKnown RBP19.42■□□□□ 0.7
TRAF4-203ENST00000394925 KRT12Q99456 494 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 PHACTR1Q9C0D0 580 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 RHOJQ9H4E5 214 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 POPDC3Q9HBV1 291 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 QPCTLQ9NXS2 382 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 CNIH4Q9P003 139 aa19.42■□□□□ 0.7
TRAF4-203ENST00000394925 C15orf38-AP3S2A0A0A6YYH1 394 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 SAP18O00422 153 aaKnown RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 CCNT2O60583 730 aaKnown RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 TGFB1P01137 390 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 TACR1P25103 407 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 GDF1P27539 372 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 CEACAM8P31997 349 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 SSR2P43308 183 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 ARL4CP56559 192 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 IGLV3-21P80748 117 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 ACSF3Q4G176 576 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 BBOF1Q8ND07 529 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 FBXO36Q8NEA4 188 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 C7orf57Q8NEG2 295 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 ART5Q96L15 291 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 GAL3ST4Q96RP7 486 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 CAB39LQ9H9S4 337 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 MOCS1Q9NZB8 636 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 CD274Q9NZQ7 290 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 MTRF1LQ9UGC7 380 aaKnown RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 CHCHD2Q9Y6H1 151 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-203ENST00000394925 DNHD1Q96M86 4753 aa19.41■□□□□ 0.7
TRAF4-203ENST00000394925 AHRRA9YTQ3 701 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 PIAS1O75925 651 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SCELO95171 688 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 EPPINO95925 133 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 RAF1P04049 648 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 FBXO45P0C2W1 286 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 CCDC166P0CW27 439 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 PCNAP12004 261 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 EPORP19235 508 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SERPINB3P29508 390 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 DUSP8Q13202 625 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SLAMF1Q13291 335 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 FASTKD3Q14CZ7 662 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 DAZAP2Q15038 168 aaPredicted RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 OR4D1Q15615 310 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 FBXL19-AS1Q494R0 122 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 TMEM35AQ53FP2 167 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SLC35F6Q8N357 371 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 FBXL20Q96IG2 436 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 DOHHQ9BU89 302 aa19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SORBS1Q9BX66 1292 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 RPF2Q9H7B2 306 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.4■□□□□ 0.77e-6■■■□□ 16.5
TRAF4-203ENST00000394925 PTBP2Q9UKA9 531 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 CNOT11Q9UKZ1 510 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 MTO1Q9Y2Z2 717 aaKnown RBP19.4■□□□□ 0.7
TRAF4-203ENST00000394925 IQANK1A0A1B0GTG1 560 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 WISP3O95389 354 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 IL2RAP01589 272 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 HERVK_113P63132 956 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 ERVK-8P63133 956 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 PLIN5Q00G26 463 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 POU4F1Q01851 419 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 PDIA2Q13087 525 aaKnown RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 KEAP1Q14145 624 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 TBCCQ15814 346 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 DEFB113Q30KQ7 82 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 CDKL4Q5MAI5 379 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 POMZP3Q6PJE2 187 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 CHSY3Q70JA7 882 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 Q71RC1 249 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 SLC29A4Q7RTT9 530 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 MAATS1Q7Z4T9 603 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 DND1Q8IYX4 353 aaKnown RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 WFDC11Q8NEX6 87 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 EXT2Q93063 718 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 MCMBPQ9BTE3 642 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 ERVK-6Q9BXR3 956 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 OR51B5Q9H339 312 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 NSMCE4AQ9NXX6 385 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 ZNF629Q9UEG4 869 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 FOXD3Q9UJU5 478 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 SNX12Q9UMY4 172 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 ERVK-19Q9WJR5 959 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 NSD1Q96L73 2696 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-203ENST00000394925 KIAA1549Q9HCM3 1950 aa19.39■□□□□ 0.69
TRAF4-203ENST00000394925 TUBAL3A6NHL2 446 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 PHGDHO43175 533 aaKnown RBP19.38■□□□□ 0.69
TRAF4-203ENST00000394925 PRKRAO75569 313 aaKnown RBP19.38■□□□□ 0.69
TRAF4-203ENST00000394925 TRAPPC6AO75865 159 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 ATE1O95260 518 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 C1QAP02745 245 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 EPXP11678 715 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 CD1DP15813 335 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 ALOX15P16050 662 aaPredicted RBP19.38■□□□□ 0.69
TRAF4-203ENST00000394925 TIMP3P35625 211 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 ZNF136P52737 540 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 LTBQ06643 244 aa19.38■□□□□ 0.69
TRAF4-203ENST00000394925 CRYZQ08257 329 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms