RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PIGGQ5H8A4 983 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TCHHL1Q5QJ38 904 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM64Q6YI46 380 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 SH2D5Q6ZV89 423 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ZGRF1Q86YA3 2104 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CTAGE4Q8IX94 777 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 GSPT2Q8IYD1 628 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM156Q8N614 296 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 HORMAD2Q8N7B1 307 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF441Q8N8Z8 693 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PSD4Q8NDX1 1056 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 SIMC1Q8NDZ2 872 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 OR2M7Q8NG81 312 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 OR8K3Q8NH51 312 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 OR14A16Q8NHC5 309 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 AGAP11Q8TF27 550 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF483Q8TF39 744 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 DAZLQ92904 295 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 NTMT1Q9BV86 223 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 MRPL1Q9BYD6 325 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 ROGDIQ9GZN7 287 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PSD3Q9NYI0 1048 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 TMEM216Q9P0N5 145 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CES1P1Q9UKY3 287 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PPT2Q9UMR5 302 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 MRPS33Q9Y291 106 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 KLF13Q9Y2Y9 288 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 PCDHGA11Q9Y5H2 935 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 CSMD2Q7Z408 3487 aa8.19□□□□□ -1.1
ATG4A-205ENST00000394892 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
ATG4A-205ENST00000394892 FAM166BA8MTA8 275 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 FCHO1O14526 889 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 RIPK2O43353 540 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 DLX3O60479 287 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 PDE9AO76083 593 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 CLDN9O95484 217 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 GPR75O95800 540 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ABHD2P08910 425 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 RBP1P09455 135 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 RFPL3SP0C7P2 107 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ALOX15P16050 662 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 TNNI3P19429 210 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 AGAP20933 346 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 PIGAP37287 484 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 SERPINB9P50453 376 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ARFIP1P53367 373 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 SLC37A1P57057 533 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 MGAT2Q10469 447 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 GALNT1Q10472 559 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 TBL3Q12788 808 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 SERTAD2Q14140 314 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 GLE1Q53GS7 698 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 FRG2Q64ET8 278 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 METTL2BQ6P1Q9 378 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 GHDCQ8N2G8 530 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ACBD4Q8NC06 268 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 OR4F6Q8NGB9 312 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 CHTF18Q8WVB6 975 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 TANKQ92844 425 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 NTNG2Q96CW9 530 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 FRG2BQ96QU4 278 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 MRPL57Q9BQC6 102 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 DEFB127Q9H1M4 99 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ZDHHC11Q9H8X9 412 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 TUBA8Q9NY65 449 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 MTRF1LQ9UGC7 380 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 EMCNQ9ULC0 261 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 ANGPTL3Q9Y5C1 460 aa8.18□□□□□ -1.1
ATG4A-205ENST00000394892 TNPO3Q9Y5L0 923 aaKnown RBP8.18□□□□□ -1.1
ATG4A-205ENST00000394892 APCP25054 2843 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 A0A087WUV0 522 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 LRRC3CA6NJW4 275 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 A8MVJ9 347 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 SEMA3DO95025 777 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 LRATO95237 230 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 PDYNP01213 254 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 TUBB4AP04350 444 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 KLK1P06870 262 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 SNRPAP09012 282 aaKnown RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 NR2F6P10588 404 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 COL6A2P12110 1019 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ENDOUP21128 410 aaKnown RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 SSTR4P31391 388 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HPDP32754 393 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HSD17B3P37058 310 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 DNASE1L1P49184 302 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HTR6P50406 440 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 CCNG1P51959 295 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 RAP1GDS1P52306 607 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 PPIAP62937 165 aaKnown RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 HERVK_113P63132 956 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ERVK-8P63133 956 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 RCN2Q14257 317 aa8.17□□□□□ -1.1
ATG4A-205ENST00000394892 ZNF267Q14586 743 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-205ENST00000394892 EBPQ15125 230 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms