RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CNIH4Q9P003 139 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 BACE2Q9Y5Z0 518 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 RP1L1Q8IWN7 2480 aaPredicted RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TRPM7Q96QT4 1865 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TRBV4-1A0A0J9YWV2 114 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 OR12D1P0DN82 309 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 GGT2P36268 569 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 YIPF7Q8N8F6 280 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 F2RL3Q96RI0 385 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 CTRCQ99895 268 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 VWA8A3KMH1 1905 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 M0R082 166 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 SLC16A6O15403 523 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 H1F0P07305 194 aaKnown RBP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 CLTBP09497 229 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 CCL5P13501 91 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 PCMT1P22061 227 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 AKR1D1P51857 326 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TEAD2Q15562 447 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 DUSP7Q16829 419 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 KDM4DQ6B0I6 523 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 ABI3BPQ7Z7G0 1075 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 FATE1Q969F0 183 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 HOXD1Q9GZZ0 328 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 GULP1Q9UBP9 304 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 TRPS1Q9UHF7 1281 aa12.61□□□□□ -0.39
NFKB1-202ENST00000394820 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 AREL1O15033 823 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PDPK1O15530 556 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 GPX5O75715 221 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FGF18O76093 207 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ASMTP46597 345 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 E2F2Q14209 437 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 BCL2L15Q5TBC7 163 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FCRLBQ6BAA4 426 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 LAIR2Q6ISS4 152 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 SLC46A3Q7Z3Q1 461 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 RNF31Q96EP0 1072 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 INMT-MINDY4F8WBC2 141 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 H7BY64 318 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 HPGDSO60760 199 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 CHMP24386 653 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ODF4Q2M2E3 257 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 LY6G5CQ5SRR4 150 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 TUBA3EQ6PEY2 450 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF438Q7Z4V0 828 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FGD2Q7Z6J4 655 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FAM46DQ8NEK8 389 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PRAP1Q96NZ9 151 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 NDUFAF4Q9P032 175 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF282Q9UDV7 671 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 TAC3Q9UHF0 121 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PPIEQ9UNP9 301 aaKnown RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 SZT2Q5T011 3432 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 DOCK4Q8N1I0 1966 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PRMT3O60678 531 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ABLIM3O94929 683 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 PRG2P13727 222 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 LHCGRP22888 699 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 ZNF81P51508 661 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 CTSCP53634 463 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 SELENOWP63302 87 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 TATDN3Q17R31 274 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FRMPD2BQ6IN97 320 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 COMMD6Q7Z4G1 85 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 SLC39A11Q8N1S5 342 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 TMEM80Q96HE8 168 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 C12orf66Q96MD2 445 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 NRTNQ99748 197 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 C11orf54Q9H0W9 315 aaPredicted RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 P2RY12Q9H244 342 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 XKR8Q9H6D3 395 aa12.6□□□□□ -0.39
NFKB1-202ENST00000394820 FAM120CQ9NX05 1096 aaKnown RBP12.6□□□□□ -0.39
NFKB1-202ENST00000394820 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ETHE1O95571 254 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 VEGFBP49765 207 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 HNRNPFP52597 415 aaKnown RBP12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ID2Q02363 134 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 RPA4Q13156 261 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 POU4F3Q15319 338 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 TPRG1Q6ZUI0 275 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
NFKB1-202ENST00000394820 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms