RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 EPYCQ99645 322 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR51I1Q9H343 314 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TRPC4Q9UBN4 977 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 WBP11Q9Y2W2 641 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 GSAPA4D1B5 854 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 C5orf58C9J3I9 102 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ZW10O43264 779 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 UGT2B11O75310 529 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 SEMA7AO75326 666 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 RYKP34925 604 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 AHRP35869 848 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 LIM2P55344 173 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ROR2Q01974 943 aaKnown RBP14.25□□□□□ -0.13
GPC3-202ENST00000394299 NPRL3Q12980 569 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 B3GNT8Q7Z7M8 397 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 COMTD1Q86VU5 262 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 OR4C15Q8NGM1 316 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 DOK4Q8TEW6 326 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 GIPC3Q8TF64 312 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 C16orf58Q96GQ5 468 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 DCUN1D5Q9BTE7 237 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 CCDC90BQ9GZT6 254 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 RAD21L1Q9H4I0 556 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ZCCHC3Q9NUD5 404 aaKnown RBP14.25□□□□□ -0.13
GPC3-202ENST00000394299 ACER3Q9NUN7 267 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 TAS2R7Q9NYW3 318 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 SNX7Q9UNH6 387 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 KCNE3Q9Y6H6 103 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 COL4A2P08572 1712 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 LOC105369274A0A096LPK9 316 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 LOC102723532A0A0G2JNH3 316 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 FFAR1O14842 300 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 P2RX6O15547 441 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ATE1O95260 518 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ZNF888P0CJ79 500 aaPredicted RBP14.25□□□□□ -0.13
GPC3-202ENST00000394299 DRD2P14416 443 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 AKT2P31751 481 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 BROXQ5VW32 411 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 WDR53Q7Z5U6 358 aaPredicted RBP14.25□□□□□ -0.13
GPC3-202ENST00000394299 NLGN4XQ8N0W4 816 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 OR4N4Q8N0Y3 316 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 OR10G2Q8NGC3 310 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 OR4D11Q8NGI4 311 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 ZCCHC10Q8TBK6 192 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 GPR174Q9BXC1 333 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 LHPPQ9H008 270 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 NEUROD4Q9HD90 331 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 PCOLCE2Q9UKZ9 415 aa14.25□□□□□ -0.13
GPC3-202ENST00000394299 NDRG4Q9ULP0 352 aaKnown RBP14.25□□□□□ -0.13
GPC3-202ENST00000394299 FOXD2O60548 495 aaPredicted RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 ABCB7O75027 752 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 MFN2O95140 757 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 ANGPTL1O95841 491 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 XCR1P46094 333 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 LSSP48449 732 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 PPP1CAP62136 330 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SKIV2LQ15477 1246 aaKnown RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 TMEM107Q6UX40 140 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 ARMC8Q8IUR7 673 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 LACC1Q8IV20 430 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 VANGL1Q8TAA9 524 aaPredicted RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 DGCR6LQ9BY27 220 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 ACSS1Q9NUB1 689 aaPredicted RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 ERVK-18Q9QC07 812 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 CES1P1Q9UKY3 287 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 FANCMQ8IYD8 2048 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SCN2AQ99250 2005 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 TDRD6O60522 2096 aaKnown RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 PROM1O43490 865 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SLC28A2O43868 658 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 UGT2B7P16662 529 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 CD247P20963 164 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 NR4A1P22736 598 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 PXNP49023 591 aaPredicted RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 TRA2BP62995 288 aaKnown RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 OLR1P78380 273 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 LASP1Q14847 261 aaKnown RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 COL19A1Q14993 1142 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 FCRL6Q6DN72 434 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 FRMPD2BQ6IN97 320 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 ZNF438Q7Z4V0 828 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 OR4N5Q8IXE1 308 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 LGI4Q8N135 537 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SIMC1Q8NDZ2 872 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 FBLIM1Q8WUP2 373 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 ZFAND2BQ8WV99 257 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 GEMIN6Q8WXD5 167 aaKnown RBP14.24□□□□□ -0.13
GPC3-202ENST00000394299 COL21A1Q96P44 957 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SARGQ9BW04 601 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 FAIM2Q9BWQ8 316 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 TPSD1Q9BZJ3 242 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 A4GALTQ9NPC4 353 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 SLC6A14Q9UN76 642 aa14.24□□□□□ -0.13
GPC3-202ENST00000394299 M0R129 80 aa14.23□□□□□ -0.13
GPC3-202ENST00000394299 ADAMDEC1O15204 470 aa14.23□□□□□ -0.13
GPC3-202ENST00000394299 PCDHGA12O60330 932 aa14.23□□□□□ -0.13
GPC3-202ENST00000394299 CALRP27797 417 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms