RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ANP32BQ92688 251 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 NINJ1Q92982 152 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 RGMAQ96B86 450 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 SPACA9Q96E40 222 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 KCNF1Q9H3M0 494 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 LDAHQ9H6V9 325 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 ZNF703Q9H7S9 590 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 ZFP64Q9NPA5 681 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 OPTCQ9UBM4 332 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 B4GALT7Q9UBV7 327 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 Q9UFV3 132 aa16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 BOKQ9UMX3 212 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-202ENST00000394082 MYOCOSA0A1B0GUC4 107 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 ATP6AP2A0A1C7CYW4 349 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 ANKRD33BA6NCL7 494 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 OR6C76A6NM76 312 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 UGDHO60701 494 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 ATP6AP2O75787 350 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 FBXO45P0C2W1 286 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 SLC35E2BP0CK96 405 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 EPB42P16452 691 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 CRABP2P29373 138 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 TNFRSF17Q02223 184 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 LIPJQ5W064 366 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 CAPN12Q6ZSI9 719 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 MAATS1Q7Z4T9 603 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 FBXW8Q8N3Y1 598 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 RHEBL1Q8TAI7 183 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 ALG9Q9H6U8 611 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 SAYSD1Q9NPB0 183 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 L3MBTL1Q9Y468 752 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 PCDHGA11Q9Y5H2 935 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 IKBKGQ9Y6K9 419 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 ITPR3Q14573 2671 aa16.12■□□□□ 0.17
SNRPA1-202ENST00000394082 SYCE1LA8MT33 242 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 PROM1O43490 865 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 CELA3AP09093 270 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 PCNAP12004 261 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 ALOX15P16050 662 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 ENDOUP21128 410 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 PTX3P26022 381 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 SERPINB3P29508 390 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 DNAJA1P31689 397 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 PIGAP37287 484 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 BUD31P41223 144 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 ID2Q02363 134 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 FOLH1Q04609 750 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 MYBPHQ13203 477 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 NAB1Q13506 487 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 TBCELQ5QJ74 424 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 METTL2BQ6P1Q9 378 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 TBC1D1Q86TI0 1168 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 TMEM200AQ86VY9 491 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 CXXC4Q9H2H0 198 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 OR51B5Q9H339 312 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 SEMA4BQ9NPR2 832 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 CHCHD2Q9Y6H1 151 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-202ENST00000394082 IQANK1A0A1B0GTG1 560 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 H0YIV9 168 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 PLPP1O14494 284 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 ZWINTO95229 277 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 GPR75O95800 540 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 LTA4HP09960 611 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 MTHFD2P13995 350 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 ADH7P40394 386 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 RAP1GDS1P52306 607 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 ART1P52961 327 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 DLX5P56178 289 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 GPX6P59796 221 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 KCNJ2P63252 427 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 CAV1Q03135 178 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 CUL3Q13618 768 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 NTRK2Q16620 822 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 MRM1Q6IN84 353 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 SLC29A4Q7RTT9 530 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 LIX1LQ8IVB5 337 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 OR4N5Q8IXE1 308 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 NEIL3Q8TAT5 605 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 REPS1Q96D71 796 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 FOXC2Q99958 501 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 ZNF717Q9BY31 904 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 PROK2Q9HC23 129 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 LYARQ9NX58 379 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 GRHL1Q9NZI5 618 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 SPRR3Q9UBC9 169 aa16.1■□□□□ 0.17
SNRPA1-202ENST00000394082 LRRC3CA6NJW4 275 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 HSPB2A8KAH6 182 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 AHRRA9YTQ3 701 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 SUPT3HB4E1H0 165 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 SYT5O00445 386 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 SUPT3HO75486 399 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 CTAG2O75638 210 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 SLC37A1P57057 533 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 PHEXP78562 749 aa16.09■□□□□ 0.17
SNRPA1-202ENST00000394082 DLG1Q12959 904 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms