RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 SH3D21A4FU49 640 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 HMX3A6NHT5 357 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 SLC16A5O15375 505 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 CH25HO95992 272 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
ERCC2-201ENST00000391941 ZNF763Q0D2J5 394 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 TATDN3Q17R31 274 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 TYW3Q6IPR3 259 aaKnown RBP17.12■□□□□ 0.33
ERCC2-201ENST00000391941 ACSM5Q6NUN0 579 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 CCDC149Q6ZUS6 474 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 VN1R5Q7Z5H4 357 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.12■□□□□ 0.33
ERCC2-201ENST00000391941 SLC7A13Q8TCU3 470 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 CREB3L4Q8TEY5 395 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 CYB5D2Q8WUJ1 264 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 ZNF480Q8WV37 535 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 ASZ1Q8WWH4 475 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 MAPKAP1Q9BPZ7 522 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 UCK2Q9BZX2 261 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 QRSL1Q9H0R6 528 aaKnown RBP17.12■□□□□ 0.33
ERCC2-201ENST00000391941 POLR2J3Q9H1A7 115 aaKnown RBP17.12■□□□□ 0.33
ERCC2-201ENST00000391941 KCNK12Q9HB15 430 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 B3GAT2Q9NPZ5 323 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 STUB1Q9UNE7 303 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 SSR3Q9UNL2 185 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 GRIP1Q9Y3R0 1128 aa17.12■□□□□ 0.33
ERCC2-201ENST00000391941 HPGDSO60760 199 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 B4GALT2O60909 372 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 OR12D1P0DN82 309 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 SCN1BQ07699 218 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 LRRC32Q14392 662 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
ERCC2-201ENST00000391941 CLEC12AQ5QGZ9 265 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 LHFPL3Q86UP9 236 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 SETD6Q8TBK2 473 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 TMEM159Q96B96 161 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
ERCC2-201ENST00000391941 ZNF106Q9H2Y7 1883 aaKnown RBP17.11■□□□□ 0.33
ERCC2-201ENST00000391941 AP1M2Q9Y6Q5 423 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 ELAVL4P26378 380 aaKnown RBP17.11■□□□□ 0.33
ERCC2-201ENST00000391941 METAP1P53582 386 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 CRTC2Q53ET0 693 aaPredicted RBP17.11■□□□□ 0.33
ERCC2-201ENST00000391941 CASP12Q6UXS9 341 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 ENKURQ8TC29 256 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 LRR1Q96L50 414 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 HDHD5Q9BXW7 423 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 FRS3O43559 492 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 RAB8AP61006 207 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 C22orf39Q6P5X5 142 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 UNC5DQ6UXZ4 953 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 SLCO4C1Q6ZQN7 724 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 DEFB128Q7Z7B8 93 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 KRT73Q86Y46 540 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 FRMD6Q96NE9 622 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 PLA2G12AQ9BZM1 189 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 SLC22A4Q9H015 551 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 FAM83DQ9H4H8 585 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 BRF2Q9HAW0 419 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 TAAR2Q9P1P5 351 aa17.11■□□□□ 0.33
ERCC2-201ENST00000391941 SHISA3A0PJX4 238 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 HYKKA2RU49 373 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 NPC1O15118 1278 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 ALX3O95076 343 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 HMGA2P52926 109 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 DSTNP60981 165 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 YIF1BQ5BJH7 314 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 TRIM40Q6P9F5 258 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 GET4Q7L5D6 327 aaPredicted RBP17.1■□□□□ 0.33
ERCC2-201ENST00000391941 OR52I1Q8NGK6 324 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 RNF121Q9H920 327 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 MIEF1Q9NQG6 463 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 SEMA3GQ9NS98 782 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 MOSPD1Q9UJG1 213 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 ALG5Q9Y673 324 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 C2orf92A0A1B0GVN3 265 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 GSAPA4D1B5 854 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 A8MVJ9 347 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 PPM1DO15297 605 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 HRO43593 1189 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 PRKRAO75569 313 aaKnown RBP17.1■□□□□ 0.33
ERCC2-201ENST00000391941 LALBAP00709 142 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 URODP06132 367 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 GABRR2P28476 465 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 BTBD16Q32M84 506 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 SPIN4Q56A73 249 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 SPOUT1Q5T280 376 aaKnown RBP17.1■□□□□ 0.33
ERCC2-201ENST00000391941 C11orf96Q7Z7L8 435 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 NANOGP1Q8N7R0 232 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
ERCC2-201ENST00000391941 OR4M1Q8NGD0 313 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 SLC25A46Q96AG3 418 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 ZBED6CLQ96FA7 236 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms