RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TAAR9Q96RI9 348 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TNFRSF13CQ96RJ3 184 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ACOX2Q99424 681 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CGRRF1Q99675 332 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 COQ7Q99807 217 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RNF5Q99942 180 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 KCTD14Q9BQ13 255 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC3Q9BQI4 270 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM47Q9BQJ4 181 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 DPH7Q9BTV6 452 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ABHD6Q9BV23 337 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MECRQ9BV79 373 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SARGQ9BW04 601 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FAIM2Q9BWQ8 316 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TBL1XR1Q9BZK7 514 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ELOVL4Q9GZR5 314 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 DNAI2Q9GZS0 605 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 S1PR5Q9H228 398 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ELAC1Q9H777 363 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TTC12Q9H892 705 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 NMUR1Q9HB89 426 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FANCEQ9HB96 536 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 AS3MTQ9HBK9 375 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF286AQ9HBT8 521 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF160Q9HCG1 818 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MBNL1Q9NR56 388 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 IARS2Q9NSE4 1012 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 EXOC1Q9NV70 894 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF701Q9NV72 531 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TMLHEQ9NVH6 421 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 ASF1BQ9NVP2 202 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 THAP1Q9NVV9 213 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PAG1Q9NWQ8 432 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TAS2R1Q9NYW7 299 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 EHD2Q9NZN4 543 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 CD274Q9NZQ7 290 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 HACD3Q9P035 362 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RCOR3Q9P2K3 495 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 MYEF2Q9P2K5 600 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GAGE2DQ9UEU5 116 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OR14J1Q9UGF5 321 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GJD2Q9UKL4 321 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 OGDHLQ9ULD0 1010 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PNMA8BQ9ULN7 279 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 NAALADL1Q9UQQ1 740 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXA2Q9Y261 457 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 SIGLEC7Q9Y286 467 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TP53TG5Q9Y2B4 290 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 RPH3AQ9Y2J0 694 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 GDAQ9Y2T3 454 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM96BQ9Y3D0 163 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TBX22Q9Y458 520 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 WDR45Q9Y484 360 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 LSM4Q9Y4Z0 139 aaKnown RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 PCDHA10Q9Y5I2 948 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TSSC4Q9Y5U2 329 aaPredicted RBP-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM14AQ9Y6G1 99 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 R4GN34 69 aa-0.47□□□□□ -2.48
TRAJ28-201ENST00000390509 BRD4O60885 1362 aaPredicted RBP-0.47□□□□□ -2.49
TRAJ28-201ENST00000390509 RGS12O14924 1447 aa-0.47□□□□□ -2.49
TRAJ28-201ENST00000390509 RSF1Q96T23 1441 aaPredicted RBP-0.47□□□□□ -2.49
TRAJ28-201ENST00000390509 PIEZO2Q9H5I5 2752 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAH3Q8TD57 4116 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLV11-55A0A075B6I3 123 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A087WZ39 114 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TRBV5-4A0A0C4DH59 114 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A0D9SG42 100 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TRBV5-5A0A0J9YX44 114 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A0J9YXY3 114 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1W2PP18 115 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1W2PPM0 123 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PLEKHD1A6NEE1 506 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 POM121BA6NF01 834 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TRABD2BA6NFA1 517 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LIPT2A6NK58 231 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF212BA8MTL3 300 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 A8MUI8 341 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 EFCAB8A8MWE9 144 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TMCO5BA8MYB1 307 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ODF3BA8MYP8 253 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 H3BML4 177 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM189-UBE2V1I3L0A0 370 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC28A1O00337 649 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC17A2O00624 439 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 XKRYO14609 159 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 AREL1O15033 823 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GPR39O43194 453 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PSMD3O43242 534 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 BUB1O43683 1085 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA12O60330 932 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PDE8AO60658 829 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CYTIPO60759 359 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DPM1O60762 260 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FCGR3BO75015 233 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CAND2O75155 1236 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF189O75820 626 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ALDH1L1O75891 902 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TSPAN9O75954 239 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 KIAA0754O94854 1291 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms