RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NPPBP16860 134 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 HSPA6P17066 643 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CTRB1P17538 263 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SERPINF1P36955 418 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 BTDP43251 543 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TFPI2P48307 235 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 EMP2P54851 167 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF616Q08AN1 781 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 RASGEF1BQ0VAM2 473 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TCP10Q12799 353 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPARCL1Q14515 664 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF235Q14590 738 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DLG2Q15700 870 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CD226Q15762 336 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 HIST2H2ACQ16777 129 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 HSP90AB3PQ58FF7 597 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DGAT2L7PQ6IED9 249 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 LINGO4Q6UY18 593 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 RINLQ6ZS11 566 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 NOL8Q76FK4 1167 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DPPA4Q7L190 304 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMEM179BQ7Z7N9 219 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CTAGE6Q86UF2 777 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF557Q8N988 423 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TDRD5Q8NAT2 981 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DENND6BQ8NEG7 585 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR10G2Q8NGC3 310 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR4D10Q8NGI6 311 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR5L1Q8NGL2 311 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR1J2Q8NGS2 313 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLC35G2Q8TBE7 412 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 VN1R17PQ8TDU5 208 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CHURC1Q8WUH1 139 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 MAIP1Q8WWC4 291 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CNOT9Q92600 299 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 PROX1Q92786 737 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 NAT6Q93015 286 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 C18orf25Q96B23 403 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 RNFT2Q96EX2 444 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF514Q96K75 400 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 IL12RB2Q99665 862 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SAV1Q9H4B6 383 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF702PQ9H963 129 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 IL1RAPL2Q9NP60 686 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SIRT7Q9NRC8 400 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ABCC13Q9NSE7 274 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 STARD5Q9NSY2 213 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMEM106BQ9NUM4 274 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 VPS54Q9P1Q0 977 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 OSGIN1Q9UJX0 560 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ADAM28Q9UKQ2 775 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 MGAT4AQ9UM21 535 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SNX13Q9Y5W8 968 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CPQQ9Y646 472 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPIN1Q9Y657 262 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 RFX7Q2KHR2 1363 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 PLEKHG2Q9H7P9 1386 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 USP6P35125 1406 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 PHRF1Q9P1Y6 1649 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SIP14410 1827 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 LAMA4Q16363 1823 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TUBGCP6Q96RT7 1819 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 BAZ2AQ9UIF9 1905 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 XIRP2A4UGR9 3374 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 ASPMQ8IZT6 3477 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 DLG5Q8TDM6 1919 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 DICER1Q9UPY3 1922 aaKnown RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 DENND4AQ7Z401 1863 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 KIAA1671Q9BY89 1806 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 TNRC6BQ9UPQ9 1833 aaKnown RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 AFF2P51816 1311 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 TEX48A0A1B0GUV7 120 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ELOVL7A1L3X0 281 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 PSMB11A5LHX3 300 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ODF3BA8MYP8 253 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 LYNX1G3V0Z9 82 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ABCD4O14678 606 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 SCAMP2O15127 329 aaKnown RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 SEPT4O43236 478 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 TFP02787 698 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 PF4V1P10720 104 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF250P15622 560 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 GABRR1P24046 479 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 MMP11P24347 488 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 CD40LGP29965 261 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 BTCP35070 178 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 NPBWR1P48145 328 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 PDX1P52945 283 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 CNBPP62633 177 aaKnown RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 CX3CL1P78423 397 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 CD164Q04900 197 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF154Q13106 437 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 PDCLQ13371 301 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM53BQ14153 422 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 SIM2Q14190 667 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 MLF2Q15773 248 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ADIPOQQ15848 244 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZSCAN26Q16670 478 aa-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 SHROOM1Q2M3G4 852 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-540P-201ENST00000384622 ALDH1L2Q3SY69 923 aa-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms