RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CLIP2Q9UDT6 1046 aa4.58□□□□□ -1.68
RNU6-40P-201ENST00000384254 NUDCQ9Y266 331 aa4.58□□□□□ -1.68
RNU6-40P-201ENST00000384254 NOTCH4Q99466 2003 aa4.58□□□□□ -1.68
RNU6-40P-201ENST00000384254 A0A0U1RRA0 63 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 SRRM4A7MD48 611 aaKnown RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MPTX1A8MV57 137 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MEI4A8MW99 385 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 NEDD8-MDP1E9PL57 170 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 CFLARO15519 480 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 LRP3O75074 770 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 CAMLGP49069 296 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 GSCP56915 257 aaPredicted RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 NLRP11P59045 1033 aaKnown RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MYBPC1Q00872 1141 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 KARSQ15046 597 aaKnown RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 NECTIN1Q15223 517 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MS4A18Q3C1V0 323 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 TEX35Q5T0J7 233 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 DCAF12Q5T6F0 453 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 RAET1GQ6H3X3 334 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 IRGCQ6NXR0 463 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MCM10Q7L590 875 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZFAND4Q86XD8 727 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 WDR49Q8IV35 697 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 FCGR1BQ92637 280 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 COG3Q96JB2 828 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 TNFRSF13CQ96RJ3 184 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 MCRIP2Q9BUT9 160 aaKnown RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 FGFBP2Q9BYJ0 223 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 STRADBQ9C0K7 418 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 RWDD1Q9H446 243 aaPredicted RBP4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 THEGQ9P2T0 379 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 PLEKHA6Q9Y2H5 1048 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 CLCA3PQ9Y6N3 262 aa4.57□□□□□ -1.68
RNU6-40P-201ENST00000384254 FGD5Q6ZNL6 1462 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 KIF7Q2M1P5 1343 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZFAND5O76080 213 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 NXPH4O95158 308 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 GSTA1P08263 222 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZSCAN5DPP0CG00 497 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 DESP17661 470 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 TMOD1P28289 359 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 AKT2P31751 481 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 CHRNA3P32297 505 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 ID1P41134 155 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 RPL27P61353 136 aaKnown RBP4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 FASTKQ14296 549 aaKnown RBP4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 EPC2Q52LR7 807 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 LIPJQ5W064 366 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 ADAM5Q6NVV9 412 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 NEPROQ6NW34 567 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 YRDCQ86U90 279 aaKnown RBP4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 LINC00518Q8N0U6 118 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 MLKLQ8NB16 471 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 FBXO25Q8TCJ0 367 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 PCNPQ8WW12 178 aaKnown RBP4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 PHYHIPQ92561 330 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 TMEM45BQ96B21 275 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 C16orf58Q96GQ5 468 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 CBWD1Q9BRT8 395 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 NGBQ9NPG2 151 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 EIF3KQ9UBQ5 218 aaKnown RBP4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 BCAP29Q9UHQ4 241 aa4.56□□□□□ -1.68
RNU6-40P-201ENST00000384254 UBE4BO95155 1302 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 IGHV3-20A0A0C4DH32 117 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 LOC390937A0A1W2PQ73 354 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SH3PXD2BA1X283 911 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 TMEM89A2RUT3 159 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 G3V2L1 256 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 FBP2O00757 339 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 DUSP11O75319 330 aaKnown RBP4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 TRIM16O95361 564 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 FCER2P06734 321 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 FHP07954 510 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 CALML3P27482 149 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 CCND2P30279 289 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 MATKP42679 507 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 MAGEA4P43358 317 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC1A6P48664 564 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SNX1Q13596 522 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC17A1Q14916 467 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 KNOP1Q1ED39 458 aaKnown RBP4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SHROOM1Q2M3G4 852 aaPredicted RBP4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 C12orf60Q5U649 245 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 GDPGP1Q6ZNW5 385 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 ITIH5Q86UX2 942 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SLC22A16Q86VW1 577 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 KCNMB4Q86W47 210 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 AQP11Q8NBQ7 271 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 OR56B1Q8NGI3 324 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 TMEM37Q8WXS4 190 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 AGAP3Q96P47 875 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 VPS33BQ9H267 617 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 CXXC4Q9H2H0 198 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 WDR41Q9HAD4 459 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 NUDT4Q9NZJ9 180 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 AURKCQ9UQB9 309 aa4.55□□□□□ -1.68
RNU6-40P-201ENST00000384254 SH2D1BO14796 132 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 ZNF749O43361 778 aa4.54□□□□□ -1.68
RNU6-40P-201ENST00000384254 IDH3BO43837 385 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms