RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 CLEC4MQ9H2X3 399 aaPredicted RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 NMNAT1Q9HAN9 279 aaPredicted RBP13.2□□□□□ -0.3
SDC1-202ENST00000381150 RDH8Q9NYR8 311 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 GPR52Q9Y2T5 361 aa13.2□□□□□ -0.3
SDC1-202ENST00000381150 LTBP2Q14767 1821 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 TRBV5-4A0A0C4DH59 114 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 C1QBP02746 253 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 HRGP04196 525 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 SCG5P05408 212 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 SOX9P48436 509 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 AP1S1P61966 158 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 EIF4HQ15056 248 aaKnown RBP13.19□□□□□ -0.3
SDC1-202ENST00000381150 TOR1AIP1Q5JTV8 583 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 IL20RBQ6UXL0 311 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 RDH10Q8IZV5 341 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CREB3L4Q8TEY5 395 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 PLCXD1Q9NUJ7 323 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 EIF3KQ9UBQ5 218 aaKnown RBP13.19□□□□□ -0.3
SDC1-202ENST00000381150 PCDHB11Q9Y5F2 797 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 TRBC2A0A5B9 178 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CPN2P22792 545 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CRYBB2P43320 205 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 PRMT2P55345 433 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 RRAS2P62070 204 aaPredicted RBP13.19□□□□□ -0.3
SDC1-202ENST00000381150 RPS25P62851 125 aaKnown RBP13.19□□□□□ -0.3
SDC1-202ENST00000381150 TARDBPQ13148 414 aaKnown RBP eCLIP13.19□□□□□ -0.3
SDC1-202ENST00000381150 TTLL9Q3SXZ7 439 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CERS6Q6ZMG9 384 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 SLC39A5Q6ZMH5 540 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 MYO19Q96H55 970 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 C19orf43Q9BQ61 176 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 IL26Q9NPH9 171 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 TRAPPC4Q9Y296 219 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 PRRG1O14668 218 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 LILRB3O75022 631 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 FKTNO75072 461 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 EPORP19235 508 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CHRNA6Q15825 494 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 FAM46DQ8NEK8 389 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 TMEM45AQ9NWC5 275 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 PPIEQ9UNP9 301 aaKnown RBP13.19□□□□□ -0.3
SDC1-202ENST00000381150 PCDHB1Q9Y5F3 818 aa13.19□□□□□ -0.3
SDC1-202ENST00000381150 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 C6orf47O95873 294 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 AMD1P17707 334 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 GPX2P18283 190 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 CRYBA2P53672 197 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 DCDC1P59894 354 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 SRSF11Q05519 484 aaKnown RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 RPS26P11Q5JNZ5 115 aaPredicted RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 TNFAIP8L2Q6P589 184 aaPredicted RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 LUZP2Q86TE4 346 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 TMEM145Q8NBT3 493 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 SLC35A5Q9BS91 424 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 FKBP14Q9NWM8 211 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 MAN2B2Q9Y2E5 1009 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 PIKFYVEQ9Y2I7 2098 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 SLC22A5O76082 557 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 ARHGEF15O94989 841 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 HNF1BP35680 557 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 CSNK1DP48730 415 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 MC1RQ01726 317 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 TLE2Q04725 743 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 ZNF91Q05481 1191 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 LAMTOR1Q6IAA8 161 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 CREB3L2Q70SY1 520 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 DDX53Q86TM3 631 aaKnown RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 GDPD1Q8N9F7 314 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 OTUB1Q96FW1 271 aaPredicted RBP13.18□□□□□ -0.3
SDC1-202ENST00000381150 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 ZFYVE1Q9HBF4 777 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 NCKAP1Q9Y2A7 1128 aa13.18□□□□□ -0.3
SDC1-202ENST00000381150 TRBV4-1A0A0J9YWV2 114 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 C5orf58C9J3I9 102 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
SDC1-202ENST00000381150 CH25HO95992 272 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 EPHB3P54753 998 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 ABRQ12979 859 aa13.17□□□□□ -0.3
SDC1-202ENST00000381150 NFATC2Q13469 925 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms