RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DDX47Q9H0S4 455 aaKnown RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 RHOJQ9H4E5 214 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 PLAC1Q9HBJ0 212 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 SH2D2AQ9NP31 389 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 DMRT3Q9NQL9 472 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF629Q9UEG4 869 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF490Q9ULM2 529 aaPredicted RBP14.73□□□□□ -0.05
VCX3A-201ENST00000381089 PSAT1Q9Y617 370 aa14.73□□□□□ -0.05
VCX3A-201ENST00000381089 C15orf38-AP3S2A0A0A6YYH1 394 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 IQANK1A0A1B0GTG1 560 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF500O60304 480 aaPredicted RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 IL2RAP01589 272 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 RAF1P04049 648 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 SERPINB1P30740 379 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TLX1P31314 330 aaPredicted RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 RPL21P46778 160 aaKnown RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 HSPA7P48741 367 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 POU4F1Q01851 419 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 C2orf54Q08AI8 447 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 KEAP1Q14145 624 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TBCCQ15814 346 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 FBXL19-AS1Q494R0 122 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 SYDE1Q6ZW31 735 aaPredicted RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 LACC1Q8IV20 430 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 C9orf40Q8IXQ3 194 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 PM20D2Q8IYS1 436 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TANKQ92844 425 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 ANKRD9Q96BM1 317 aaPredicted RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 HSPBAP1Q96EW2 488 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 FBXL20Q96IG2 436 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF597Q96LX8 424 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 GAL3ST4Q96RP7 486 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 PELOQ9BRX2 385 aaKnown RBP14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TMEM79Q9BSE2 394 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 DOHHQ9BU89 302 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 SLC6A15Q9H2J7 730 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 CD274Q9NZQ7 290 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TXNDC16Q9P2K2 825 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 RNF14Q9UBS8 474 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 CBLCQ9ULV8 474 aa14.72□□□□□ -0.05
VCX3A-201ENST00000381089 TUBAL3A6NHL2 446 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 CAPN14A8MX76 684 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TAPBPO15533 448 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 CCNT2O60583 730 aaKnown RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 SCELO95171 688 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 GOSR1O95249 250 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 EPPINO95925 133 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 IGKV3-11P04433 115 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 FBXO45P0C2W1 286 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 RFPL3SP0C7P2 107 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 PCNAP12004 261 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TACR1P25103 407 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 GDF1P27539 372 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TIMP3P35625 211 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TRPC1P48995 793 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 ATP6V0D1P61421 351 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 ADAM8P78325 824 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 IGLV3-21P80748 117 aaPredicted RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 CKAP4Q07065 602 aaKnown RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 CHIT1Q13231 466 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 DAZAP2Q15038 168 aaPredicted RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TMEM198Q66K66 360 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 ADNP2Q6IQ32 1131 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 ZNF793Q6ZN11 406 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 BIVMQ86UB2 503 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 ANKMY2Q8IV38 441 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 TAGAPQ8N103 731 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 RELL2Q8NC24 303 aaPredicted RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 BBOF1Q8ND07 529 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 CMTM7Q96FZ5 175 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 SH3GL2Q99962 352 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 RPF2Q9H7B2 306 aaKnown RBP14.71□□□□□ -0.05
VCX3A-201ENST00000381089 DLL4Q9NR61 685 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 PHF11Q9UIL8 331 aa14.71□□□□□ -0.05
VCX3A-201ENST00000381089 FLNAP21333 2647 aaKnown RBP14.71□□□□□ -0.06
VCX3A-201ENST00000381089 LRRC3CA6NJW4 275 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 RTCAO00442 366 aaKnown RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 TP53I11O14683 189 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 FGF17O60258 216 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 OR10H2O60403 315 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 ALOX15P16050 662 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 BUD31P41223 144 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 RAP1GDS1P52306 607 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 DEFB113Q30KQ7 82 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 ACSF3Q4G176 576 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 MED27Q6P2C8 311 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 ADGRD1Q6QNK2 874 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 RNF111Q6ZNA4 994 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 LRRC70Q7Z2Q7 622 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 UBE3DQ7Z6J8 389 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 OR4N5Q8IXE1 308 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 ST13P4Q8IZP2 240 aaPredicted RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 PDPRQ8NCN5 879 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 FBXO36Q8NEA4 188 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 SPATA4Q8NEY3 305 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 OR10G3Q8NGC4 313 aa14.7□□□□□ -0.06
VCX3A-201ENST00000381089 ZNF473Q8WTR7 871 aaKnown RBP14.7□□□□□ -0.06
VCX3A-201ENST00000381089 PPWD1Q96BP3 646 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms