RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PSME2Q9UL46 239 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 HCN4Q9Y3Q4 1203 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 IGLV3-19P01714 112 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 BCHEP06276 602 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 GABRG2P18507 467 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 CD247P20963 164 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 NUDT1P36639 197 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 SLC19A1P41440 591 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 CCR5P51681 352 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 NCBP2P52298 156 aaKnown RBP eCLIP21.87■■□□□ 1.09
VPS16-201ENST00000380443 CDH12P55289 794 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 GPR107Q5VW38 600 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF8Q5VWM4 474 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF7Q5VXH5 474 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 FAM92BQ6ZTR7 304 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 OR56A1Q8NGH5 318 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 TSACCQ96A04 125 aaPredicted RBP21.87■■□□□ 1.09
VPS16-201ENST00000380443 FEVQ99581 238 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 KCNK12Q9HB15 430 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 ACER3Q9NUN7 267 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 USP36Q9P275 1121 aaKnown RBP21.87■■□□□ 1.09
VPS16-201ENST00000380443 KCND3Q9UK17 655 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 F5P12259 2224 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 FAM221BA6H8Z2 402 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 RASGRP1O95267 797 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 SEMA4FO95754 770 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 CYP4B1P13584 511 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 CSNK2A2P19784 350 aaPredicted RBP21.86■■□□□ 1.09
VPS16-201ENST00000380443 AK4P27144 223 aaPredicted RBP21.86■■□□□ 1.09
VPS16-201ENST00000380443 OR1E2P47887 323 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 TP53BP2Q13625 1128 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 CCINQ13939 588 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 CEBPEQ15744 281 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 GTF2IRD2BQ6EKJ0 949 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 SLC48A1Q6P1K1 146 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 RD3Q7Z3Z2 195 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 GTF2IRD2Q86UP8 949 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 KRT73Q86Y46 540 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 LGI4Q8N135 537 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 OR8K5Q8NH50 307 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 MIPOL1Q8TD10 442 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 RAB2BQ8WUD1 216 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 MUL1Q969V5 352 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 SH3GL3Q99963 347 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 DNAAF2Q9NVR5 837 aaKnown RBP21.86■■□□□ 1.09
VPS16-201ENST00000380443 C5AR2Q9P296 337 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 CDC14AQ9UNH5 594 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 SH3GLB1Q9Y371 365 aa21.86■■□□□ 1.09
VPS16-201ENST00000380443 PLXND1Q9Y4D7 1925 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 A0A0G2JN53 185 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 A0A1W2PR48 441 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 OR2A25A4D2G3 310 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 URADA6NGE7 173 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF25A6NGN4 478 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF26H0Y7S4 382 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 B4GALT2O60909 372 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 GADD45GO95257 159 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 TNFP01375 233 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ASGR2P07307 311 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SMIM11AP58511 58 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 MVKQ03426 396 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ZP2Q05996 745 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ILF3Q12906 894 aaKnown RBP eCLIP21.85■■□□□ 1.09
VPS16-201ENST00000380443 EXOC3L2Q2M3D2 409 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 B3GNT8Q7Z7M8 397 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ASPGQ86U10 573 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SAMD14Q8IZD0 417 aaPredicted RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 DEPDC4Q8N2C3 294 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 PARP8Q8N3A8 854 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SVOPQ8N4V2 548 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 BBS10Q8TAM1 723 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 CNIH3Q8TBE1 160 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 APOBEC4Q8WW27 367 aaKnown RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 TMEM168Q9H0V1 697 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 BCL2L10Q9HD36 194 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 POLMQ9NP87 494 aaPredicted RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 ZCCHC3Q9NUD5 404 aaKnown RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 APOBEC3BQ9UH17 382 aaKnown RBP21.85■■□□□ 1.09
VPS16-201ENST00000380443 EBF1Q9UH73 591 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 CES1P1Q9UKY3 287 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 KLK4Q9Y5K2 254 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ENTPD2Q9Y5L3 495 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 OR5K4A6NMS3 321 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 C2CD4DB7Z1M9 353 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 H0Y8X5 98 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 BTN3A3O00478 584 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 PROM1O43490 865 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 CCNB2O95067 398 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 EML2O95834 649 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 HTR1AP08908 422 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 MATN1P21941 496 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 MPIP34949 423 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 GGT2P36268 569 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 KCNJ5P48544 419 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 SLC35A2P78381 396 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ALG11Q2TAA5 492 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 MLIPQ5VWP3 458 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 FAM180BQ6P0A1 224 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 DHRS4L2Q6PKH6 230 aa21.85■■□□□ 1.09
VPS16-201ENST00000380443 ABI3BPQ7Z7G0 1075 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms