RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ATP6V1G2-DDX39BF2Z307 99 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ACOX3O15254 700 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DENRO43583 198 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TFAP2AP05549 437 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 IDSP22304 550 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ARSFP54793 590 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SRSF11Q05519 484 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF33BQ06732 778 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 C17orf67Q0P5P2 114 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SLC5A12Q1EHB4 618 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 BCL7AQ4VC05 210 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 METRNLQ641Q3 311 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 RIMKLAQ8IXN7 391 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SHISA5Q8N114 240 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 KRT78Q8N1N4 520 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ANKFN1Q8N957 763 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 OR52E1Q8NGJ3 308 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 OR8K5Q8NH50 307 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 NFKBIDQ8NI38 313 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 HSH2DQ96JZ2 352 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 GORASP2Q9H8Y8 452 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 AMBNQ9NP70 447 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 VNN3Q9NY84 501 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TRPC4Q9UBN4 977 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 KCNN3Q9UGI6 736 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 GPR34Q9UPC5 381 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 AP3M1Q9Y2T2 418 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 A0A1W2PQF6 199 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 A0A1W2PRB8 838 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 A0A1W2PS29 197 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 BTN3A3O00478 584 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DLGAP1O14490 977 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 PLPP1O14494 284 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ERI3O43414 337 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ADH1BP00325 375 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 CEACAM5P06731 702 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 RPS2P15880 293 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 MAOBP27338 520 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 RCVRNP35243 200 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 LTBRP36941 435 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 PIGAP37287 484 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 VLDLRP98155 873 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 GRSF1Q12849 480 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 LRRC32Q14392 662 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 FBXL6Q8N531 539 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 LCN9Q8WX39 176 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 RAB7BQ96AH8 199 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 REPS1Q96D71 796 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 MRGPRX1Q96LB2 322 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 AIF1LQ9BQI0 150 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 APOOQ9BUR5 198 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 EPS8L2Q9H6S3 715 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TRIM45Q9H8W5 580 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 MARCH7Q9H992 704 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 KCNK12Q9HB15 430 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 OLAHQ9NV23 265 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SAMHD1Q9Y3Z3 626 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 UNC13CQ8NB66 2214 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 KCNK5O95279 499 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 SMIM18P0DKX4 95 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 FCGR1AP12314 374 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 CSTF2P33240 577 aaKnown RBP eCLIP10.27□□□□□ -0.762e-7■■■■□ 21.4
NEDD9-201ENST00000379433 FEN1P39748 380 aaKnown RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 HSPA13P48723 471 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 ID2Q02363 134 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 ADAM15Q13444 863 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 ATP6AP1Q15904 470 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 MEP1AQ16819 746 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 CNPY1Q3B7I2 92 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 SPIN4Q56A73 249 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF425Q6IV72 752 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 MEX3BQ6ZN04 569 aaKnown RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 DBX2Q6ZNG2 339 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 Q6ZPB1 254 aaPredicted RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 CHERPQ8IWX8 916 aaKnown RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 CARFQ8N187 725 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 BPIFB6Q8NFQ5 453 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 CHTF18Q8WVB6 975 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 TFAP2CQ92754 450 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 ELSPBP1Q96BH3 223 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 DPEP2Q9H4A9 486 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 IFT80Q9P2H3 777 aaPredicted RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 MBD2Q9UBB5 411 aa10.27□□□□□ -0.76
NEDD9-201ENST00000379433 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.76
NEDD9-201ENST00000379433 C2CD4DB7Z1M9 353 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 SEMA3DO95025 777 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 PVRP15151 417 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 PTPN6P29350 595 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CTBSQ01459 385 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 VMACQ2NL98 169 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 CDKL4Q5MAI5 379 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 VN1R5Q7Z5H4 357 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 ELMOD2Q8IZ81 293 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 TBC1D19Q8N5T2 526 aa10.27□□□□□ -0.77
NEDD9-201ENST00000379433 OR1E3Q8WZA6 343 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms