RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CRB2Q5IJ48 1285 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 TCTE1Q5JU00 501 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 UNC5DQ6UXZ4 953 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 FGD2Q7Z6J4 655 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 PLEKHH3Q7Z736 793 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 OR11H7Q8NGC8 314 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 POPDC3Q9HBV1 291 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 TRPC4Q9UBN4 977 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 PPT2Q9UMR5 302 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 CACNA1CQ13936 2221 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 SH3D21A4FU49 640 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 MROH6A6NGR9 719 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 GABRR3A8MPY1 467 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 URODP06132 367 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 PTPN6P29350 595 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 SRSF11Q05519 484 aaKnown RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 FAM209BQ5JX69 171 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 ARL9Q6T311 187 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 ZNF730Q6ZMV8 503 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 ADGRG3Q86Y34 549 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 PDZD9Q8IXQ8 264 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 BTN2A2Q8WVV5 523 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 BOCQ9BWV1 1114 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 CDCA4Q9BXL8 241 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 GABARAPL1Q9H0R8 117 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 CACYBPQ9HB71 228 aaKnown RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 IMP3Q9NV31 184 aaKnown RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 COL14A1Q05707 1796 aaKnown RBP10.06□□□□□ -0.8
ARHGEF39-201ENST00000378387 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 KHDRBS3O75525 346 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 RAB36O95755 333 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TCRBP04435 133 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 HLA-DPB1P04440 258 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 SRPRAP08240 638 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PEPDP12955 493 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PBX3P40426 434 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 OAZ1P54368 228 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 CDK6Q00534 326 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TEAD4Q15561 434 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 SERPINA11Q86U17 422 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ARRDC4Q8NCT1 418 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 LRRC46Q96FV0 321 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ZNF285Q96NJ3 590 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 SLC35A5Q9BS91 424 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PDCD10Q9BUL8 212 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ZNF408Q9H9D4 720 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ATP13A1Q9HD20 1204 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 CNOT2Q9NZN8 540 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 IL20RAQ9UHF4 553 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PAICSP22234 425 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 RPS26P62854 115 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ZNF551Q7Z340 670 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 SERPINA9Q86WD7 417 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 THEM5Q8N1Q8 247 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 CLDN22Q8N7P3 220 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ZNF578Q96N58 590 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 RBP7Q96R05 134 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 HTATIP2Q9BUP3 242 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TRIM62Q9BVG3 475 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TTTY10Q9BZA0 68 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ARNT2Q9HBZ2 717 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 HACL1Q9UJ83 578 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 DHRS7Q9Y394 339 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PRELID3BQ9Y3B1 194 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PHLPP1O60346 1717 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 A0A0D9SEW6 157 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 C19orf81C9J6K1 198 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 PIRO00625 290 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 NARSO43776 548 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 CACNG3O60359 315 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 RP2O75695 350 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 MPC2O95563 127 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ATXN1LP0C7T5 689 aaKnown RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ELK1P19419 428 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TYMPP19971 482 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 ADCYAP1R1P41586 468 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 STK19P49842 368 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 TIAL1Q01085 375 aaKnown RBP eCLIP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 MC2RQ01718 297 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 SFRP5Q5T4F7 317 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 UBE2R2Q712K3 238 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 LINGO2Q7L985 606 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 C11orf96Q7Z7L8 435 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 KLBQ86Z14 1044 aa10.05□□□□□ -0.8
ARHGEF39-201ENST00000378387 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms