RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GPIP06744 558 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CTSBP07858 339 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CSNK2A2P19784 350 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 RPS3P23396 243 aaKnown RBP eCLIP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 C21orf33P30042 268 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 VBP1P61758 197 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 HERC3Q15034 1050 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 SPIN4Q56A73 249 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ZNF311Q5JNZ3 666 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 FRMPD2BQ6IN97 320 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 DLEU7Q6UYE1 221 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PIWIL3Q7Z3Z3 882 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PROSER1Q86XN7 944 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CSNK1A1LQ8N752 337 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TCEANCQ8N8B7 351 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 LINC01555Q8NAE3 123 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NAXEQ8NCW5 288 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ZG16BQ96DA0 208 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 MAELQ96JY0 434 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 DZANK1Q9NVP4 752 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TAAR2Q9P1P5 351 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 USP36Q9P275 1121 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 SLC5A10A0PJK1 596 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 G3V3Y1 287 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 GTPBP1O00178 669 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 AP3D1O14617 1153 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 SPINT1O43278 529 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 B3GALT2O43825 422 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ADAM23O75077 832 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PDGFBP01127 241 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TGFBR1P36897 503 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CAPGP40121 348 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 BNC1Q01954 994 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NDUFAF6Q330K2 333 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 IFI44LQ53G44 452 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CRB2Q5IJ48 1285 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 EOGTQ5NDL2 527 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 INTS11Q5TA45 600 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 LIPJQ5W064 366 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 AP1ARQ63HQ0 302 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 THAP5Q7Z6K1 395 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ETFBKMTQ8IXQ9 262 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 MINDY1Q8N5J2 469 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ANKFN1Q8N957 763 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 GLB1L3Q8NCI6 653 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 GIPC3Q8TF64 312 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ABCB10Q9NRK6 738 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NCDNQ9UBB6 729 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CPNE7Q9UBL6 633 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 RPS6KB2Q9UBS0 482 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NAALAD2Q9Y3Q0 740 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TCF20Q9UGU0 1960 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 HEATR5BQ9P2D3 2071 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 A0A087WXM4 84 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PLD2O14939 933 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 KDM1AO60341 852 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CEACAM5P06731 702 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 EEFSECP57772 596 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 RGNQ15493 299 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 SOWAHCQ53LP3 525 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 DCST1Q5T197 706 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ZNF765Q7L2R6 523 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TMEM179BQ7Z7N9 219 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CARM1Q86X55 608 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 VRK2Q86Y07 508 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 FAM9CQ8IZT9 166 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ZFP28Q8NHY6 868 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ZDHHC1Q8WTX9 485 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 EFHD2Q96C19 240 aaPredicted RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 LRIG1Q96JA1 1093 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 QRFPRQ96P65 431 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NTMT1Q9BV86 223 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 SLC29A3Q9BZD2 475 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 POLR2J3Q9H1A7 115 aaKnown RBP7.69□□□□□ -1.18
CKAP2-203ENST00000378037 TBC1D17Q9HA65 648 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 MRGBPQ9NV56 204 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ALKBH4Q9NXW9 302 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 CLEC1BQ9P126 229 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 ERVK-18Q9QC07 812 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 GPR34Q9UPC5 381 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 PCDHGA8Q9Y5G5 932 aa7.69□□□□□ -1.18
CKAP2-203ENST00000378037 NYNRINQ9P2P1 1898 aaKnown RBP7.68□□□□□ -1.18
CKAP2-203ENST00000378037 FAM208BQ5VWN6 2430 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 ANKRD36A6QL64 1941 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 LOC100130705A0A1B0GUX0 176 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
CKAP2-203ENST00000378037 VEGFDO43915 354 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 DOK2O60496 412 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 CDC40O60508 579 aaKnown RBP eCLIP7.68□□□□□ -1.18
CKAP2-203ENST00000378037 SLCO2B1O94956 709 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 BCL10O95999 233 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 HNRNPCP07910 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
CKAP2-203ENST00000378037 NR2F6P10588 404 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 FUT1P19526 365 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 SHMT2P34897 504 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 MPIP34949 423 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 INPP1P49441 399 aa7.68□□□□□ -1.18
CKAP2-203ENST00000378037 SUOXP51687 545 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms