RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 RPS25P62851 125 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 ELOAQ14241 798 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 SLC35F1Q5T1Q4 408 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 PGBD2Q6P3X8 592 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 SHFQ7M4L6 423 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 OR7G1Q8NGA0 311 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 OR52I1Q8NGK6 324 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 SLC7A13Q8TCU3 470 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 OTUB1Q96FW1 271 aaPredicted RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 IGSF21Q96ID5 467 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 RACGAP1Q9H0H5 632 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 STARD7Q9NQZ5 370 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 LSM7Q9UK45 103 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 NDRG2Q9UN36 371 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 C5orf42Q9H799 3197 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 B4GALT2O60909 372 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 ALX3O95076 343 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 ADAP00813 363 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.1■□□□□ 0.33
GNE-201ENST00000377902 ASAH1Q13510 395 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 HEPACAMQ14CZ8 416 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 YIF1BQ5BJH7 314 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 MFSD4BQ5TF39 518 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 C12orf73Q69YU5 71 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 GDPD4Q6W3E5 623 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 SIMC1Q8NDZ2 872 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 NLGN4YQ8NFZ3 816 aaPredicted RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 GATAD2BQ8WXI9 593 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 CXorf40BQ96DE9 158 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 MIEF1Q9NQG6 463 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 ENOPH1Q9UHY7 261 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 HS3ST2Q9Y278 367 aa17.1■□□□□ 0.33
GNE-201ENST00000377902 RPL36Q9Y3U8 105 aaKnown RBP17.1■□□□□ 0.33
GNE-201ENST00000377902 SLC5A10A0PJK1 596 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 SMLR1H3BR10 107 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 EFEMP2O95967 443 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
GNE-201ENST00000377902 CD79BP40259 229 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 GSTM5P46439 218 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 GPLD1P80108 840 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 RDH10Q8IZV5 341 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 VWA5B2Q8N398 1253 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 PROKR2Q8NFJ6 384 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 TM9SF4Q92544 642 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 C1GALT1C1Q96EU7 318 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 LMLNQ96KR4 655 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 FRMD6Q96NE9 622 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 RNF121Q9H920 327 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 RPRD1BQ9NQG5 326 aaKnown RBP17.09■□□□□ 0.33
GNE-201ENST00000377902 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 A0A0G2JMP0 313 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 ZNF197O14709 1029 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 OLFM2O95897 454 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 MLLT11Q13015 90 aaPredicted RBP17.09■□□□□ 0.33
GNE-201ENST00000377902 ACSM5Q6NUN0 579 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 GDPGP1Q6ZNW5 385 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 PDZD3Q86UT5 571 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 UCN3Q969E3 161 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 GPA33Q99795 319 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 ACAT2Q9BWD1 397 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 COMMD3Q9UBI1 195 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 INSL5Q9Y5Q6 135 aa17.09■□□□□ 0.33
GNE-201ENST00000377902 TNFRSF10AO00220 468 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 SH3BP5O60239 455 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 C1orf105O95561 183 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 YES1P07947 543 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 RPS5P46782 204 aaKnown RBP17.08■□□□□ 0.33
GNE-201ENST00000377902 DGKGP49619 791 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 MAN2A2P49641 1150 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 EPHB3P54753 998 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 SNRPD2P62316 118 aaKnown RBP17.08■□□□□ 0.33
GNE-201ENST00000377902 PCDH1Q08174 1060 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 TMEM115Q12893 351 aaPredicted RBP17.08■□□□□ 0.33
GNE-201ENST00000377902 HSPB3Q12988 150 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 NFE2L1Q14494 772 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 TMEM201Q5SNT2 666 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 MEDAGQ5VYS4 303 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 ERAP2Q6P179 960 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 SYCE2Q6PIF2 218 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 XKRXQ6PP77 449 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.33
GNE-201ENST00000377902 TRIM69Q86WT6 500 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 TMEM25Q86YD3 366 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 CFAP206Q8IYR0 622 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 OR8J1Q8NGP2 316 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 OR52P1PQ8NH57 321 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 PDXPQ96GD0 296 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 LRR1Q96L50 414 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 MRPL9Q9BYD2 267 aaKnown RBP17.08■□□□□ 0.33
GNE-201ENST00000377902 NLNQ9BYT8 704 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 CPEB1Q9BZB8 566 aaKnown RBP17.08■□□□□ 0.33
GNE-201ENST00000377902 SEMA3GQ9NS98 782 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 MAPRE3Q9UPY8 281 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 CCL26Q9Y258 94 aa17.08■□□□□ 0.33
GNE-201ENST00000377902 ITM2BQ9Y287 266 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms