RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 METTL21EPA6NDL7 271 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 H3BNC9 293 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 H7BY64 318 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RFPL1O75677 317 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 PRAMEF12O95522 483 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 DGKQP52824 942 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SP140Q13342 867 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TBRG1Q3YBR2 411 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 MARCH9Q86YJ5 346 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 BOLLQ8N9W6 283 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 OR2L3Q8NG85 312 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 OR4K14Q8NGD5 310 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 FIBINQ8TAL6 211 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 PRAP1Q96NZ9 151 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RBP7Q96R05 134 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SLC30A2Q9BRI3 323 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 WACQ9BTA9 647 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 APOOQ9BUR5 198 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 AGPAT4Q9NRZ5 378 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SLC6A14Q9UN76 642 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RPS3P23396 243 aaKnown RBP eCLIP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ELK4P28324 431 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ERVFC1P60507 584 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ARF3P61204 181 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 RPS15AP62244 130 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ARF1P84077 181 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 PCLAFQ15004 111 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ERMP1Q7Z2K6 904 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SDR16C5Q8N3Y7 309 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 C1orf74Q96LT6 269 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 TMED9Q9BVK6 235 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 DPAGT1Q9H3H5 408 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF639Q9UID6 485 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 KCND3Q9UK17 655 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CMAHPQ9Y471 501 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 A6NLC8 198 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SMAD9O15198 467 aaKnown RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CDRT1O95170 752 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CSN2P05814 226 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 HERVK_113P63132 956 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF782Q6ZMW2 699 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-205ENST00000377670 PRICKLE2Q7Z3G6 844 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 IQCHQ86VS3 1027 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 CEP97Q8IW35 865 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ALDH16A1Q8IZ83 802 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 OR4C15Q8NGM1 316 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 GPR22Q99680 433 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 LGR4Q9BXB1 951 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 ERVK-6Q9BXR3 956 aa10.36□□□□□ -0.75
HIF3A-205ENST00000377670 SMIM30A4D0T7 59 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CD2P06729 351 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 XKP51811 444 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ERVK-8P63133 956 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ARL9Q6T311 187 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 EPGNQ6UW88 154 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 KLHL36Q8N4N3 616 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ASCC1Q8N9N2 400 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF548Q8NEK5 533 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 C9orf43Q8TAL5 461 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 FER1L6-AS2Q96M78 137 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 NSUN5Q96P11 429 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 TMPRSS11EQ9UL52 423 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 TLR4O00206 839 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 SOX1O00570 391 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 PDCD5O14737 125 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 HTRA2O43464 458 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 HCRTR2O43614 444 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CSF2P04141 144 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ACVR2AP27037 513 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CD70P32970 193 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CCL11P51671 97 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CLCN4P51793 760 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF423Q2M1K9 1284 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ANKDD1AQ495B1 522 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 TANGO2Q6ICL3 276 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 GLB1L3Q8NCI6 653 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 NANOS1Q8WY41 292 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ZNF285Q96NJ3 590 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 POLR2J3Q9H1A7 115 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 THSD1Q9NS62 852 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 WASF3Q9UPY6 502 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 RNF6Q9Y252 685 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 PTGDR2Q9Y5Y4 395 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 GJE1A6NN92 205 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 M0R036 132 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 GATBO75879 557 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 JUNP05412 331 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 PABPC4LP0CB38 370 aaKnown RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 GJA4P35212 333 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 SLC18A1P54219 525 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 CLDN2P57739 230 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 MVKQ03426 396 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 ADAM15Q13444 863 aa10.35□□□□□ -0.75
HIF3A-205ENST00000377670 HSF5Q4G112 596 aaPredicted RBP10.35□□□□□ -0.75
HIF3A-205ENST00000377670 SLC2A7Q6PXP3 512 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms