RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 PUM1Q14671 1186 aaKnown RBP eCLIP10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 TEAD4Q15561 434 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CCSMST1Q4G0I0 132 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 RPS26P11Q5JNZ5 115 aaPredicted RBP10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 OTOP2Q7RTS6 562 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 PDZD3Q86UT5 571 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 NANOGP1Q8N7R0 232 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 KLHL6Q8WZ60 621 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 MSLNLQ96KJ4 702 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 HIST1H2AHQ96KK5 128 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 HIST1H2AJQ99878 128 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 MAPKAP1Q9BPZ7 522 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 WFDC6Q9BQY6 131 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 H2AFJQ9BTM1 129 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 GALNT9Q9HCQ5 603 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 THSD1Q9NS62 852 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 SPATA6Q9NWH7 488 aaPredicted RBP10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 COQ3Q9NZJ6 369 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 COMMD3Q9UBI1 195 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 BTNL2Q9UIR0 455 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 LRFN2Q9ULH4 789 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 RUVBL1Q9Y265 456 aaKnown RBP10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 TRBC2A0A5B9 178 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 HEPACAM2A8MVW5 462 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 NPIPB8E9PQR5 432 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 PLOD3O60568 738 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 OR2B3O76000 313 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 APBB3O95704 486 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 ETV5P41161 510 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CSKP41240 450 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 PRIM2P49643 509 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 ETV1P50549 477 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CYP4F8P98187 520 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CDH18Q13634 790 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 FAM110CQ1W6H9 321 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 MPEG1Q2M385 716 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 GCNT6Q5T4J0 391 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 GLRX5Q86SX6 157 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 AMIGO1Q86WK6 493 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CCDC28AQ8IWP9 274 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 APCDD1Q8J025 514 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 TCEANCQ8N8B7 351 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF527Q8NB42 609 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 TRPV1Q8NER1 839 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 OR4M2Q8NGB6 313 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 OR8H1Q8NGG4 311 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 TM9SF2Q99805 663 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 STMN3Q9NZ72 180 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 CD84Q9UIB8 345 aa10.95□□□□□ -0.66
TM9SF2-201ENST00000376387 LOC102723532A0A0G2JNH3 316 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 GNG14A0A1W2PPG7 69 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 LEUTXA8MZ59 168 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 TBL1XO60907 577 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 NCR1O76036 304 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 HLA-DMAP28067 261 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SPAM1P38567 509 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 RPS25P62851 125 aaKnown RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 EEF1A2Q05639 463 aaKnown RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 TNK1Q13470 666 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 OR2G6Q5TZ20 316 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 TSSK6Q9BXA6 273 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 C1GALT1Q9NS00 363 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 KIAA1671Q9BY89 1806 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF106Q9H2Y7 1883 aaKnown RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SCN10AQ9Y5Y9 1956 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 OR5K4A6NMS3 321 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 KPNA5O15131 536 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SEC14L5O43304 696 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 PIPP12273 146 aaPredicted RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CTRB1P17538 263 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CDK6Q00534 326 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 PCDH1Q08174 1060 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SLC5A12Q1EHB4 618 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ATAT1Q5SQI0 421 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CTRB2Q6GPI1 263 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 PLET1Q6UQ28 207 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 USP30Q70CQ3 517 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 MMP21Q8N119 569 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ZFP41Q8N8Y5 198 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 OR52P1PQ8NH57 321 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 MED8Q96G25 268 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 DHRS9Q9BPW9 319 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 MND1Q9BWT6 205 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SPATA9Q9BWV2 254 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 OSGEPL1Q9H4B0 414 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SGK2Q9HBY8 427 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CPNE7Q9UBL6 633 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CYB5R1Q9UHQ9 305 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 FADS2P1A8MWK0 482 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 H3BN98 237 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ADAM12O43184 909 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 SFTPCP11686 197 aa10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 ZNF8P17098 575 aaPredicted RBP10.94□□□□□ -0.66
TM9SF2-201ENST00000376387 CPN2P22792 545 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms