RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 WHRNQ9P202 907 aa21.4■■□□□ 1.02
C9orf47-202ENST00000375850 TCRBV9S1A1TA0A576 114 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 CCDC189A1A4V9 331 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 FAM159BA6NKW6 160 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 OR6C76A6NM76 312 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 HSPB2A8KAH6 182 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 ALOX15P16050 662 aaPredicted RBP21.39■■□□□ 1.01
C9orf47-202ENST00000375850 EPB42P16452 691 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 RAP1GDS1P52306 607 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 PHEXP78562 749 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 TNFRSF17Q02223 184 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 SLAMF1Q13291 335 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 HSPB2Q16082 182 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 SPRED3Q2MJR0 410 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 GRTP1Q5TC63 336 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 GRHL2Q6ISB3 625 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 ARSKQ6UWY0 536 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 CHDHQ8NE62 594 aaPredicted RBP21.39■■□□□ 1.01
C9orf47-202ENST00000375850 SREK1Q8WXA9 508 aaKnown RBP21.39■■□□□ 1.01
C9orf47-202ENST00000375850 NAPGQ99747 312 aaPredicted RBP21.39■■□□□ 1.01
C9orf47-202ENST00000375850 FOXC2Q99958 501 aa21.39■■□□□ 1.01
C9orf47-202ENST00000375850 SETD2Q9BYW2 2564 aaPredicted RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 IQANK1A0A1B0GTG1 560 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 CXorf49A8MYA2 514 aaPredicted RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 KERAO60938 352 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 PIAS1O75925 651 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 NADKO95544 446 aaPredicted RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 CELA3AP09093 270 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 FBXO45P0C2W1 286 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 CRABP2P29373 138 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 GALNSP34059 522 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 PIGAP37287 484 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 GNG11P61952 73 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 C3orf62Q6ZUJ4 267 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 CCDC91Q7Z6B0 441 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 TBC1D1Q86TI0 1168 aaPredicted RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 ISCA2Q86U28 154 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 LIX1Q8N485 282 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 EXT2Q93063 718 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 REPS1Q96D71 796 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 ALG9Q9H6U8 611 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 SAYSD1Q9NPB0 183 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 SEMA4BQ9NPR2 832 aaPredicted RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 DNAJB12Q9NXW2 375 aaKnown RBP21.38■■□□□ 1.01
C9orf47-202ENST00000375850 PCDHGA11Q9Y5H2 935 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 MTORP42345 2549 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 SPG11Q96JI7 2443 aa21.38■■□□□ 1.01
C9orf47-202ENST00000375850 DNAJC13O75165 2243 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 ANKRD33BA6NCL7 494 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 FAM187AA6NFU0 413 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 SYCE1LA8MT33 242 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 CAPN14A8MX76 684 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 ADH7P40394 386 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 SF3B4Q15427 424 aaKnown RBP eCLIP21.37■■□□□ 1.01
C9orf47-202ENST00000375850 ADGRD1Q6QNK2 874 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 LYPD8Q6UX82 237 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 RNF111Q6ZNA4 994 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 RAPH1Q70E73 1250 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 MAATS1Q7Z4T9 603 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 OR4N5Q8IXE1 308 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 TAGAPQ8N103 731 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 NEIL3Q8TAT5 605 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 ERP44Q9BS26 406 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 CXXC4Q9H2H0 198 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 OR51B5Q9H339 312 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 LYARQ9NX58 379 aaKnown RBP21.37■■□□□ 1.01
C9orf47-202ENST00000375850 ALKBH4Q9NXW9 302 aa21.37■■□□□ 1.01
C9orf47-202ENST00000375850 SUPT3HB4E1H0 165 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 SUPT3HO75486 399 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 CTAG2O75638 210 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 ENDOUP21128 410 aaKnown RBP21.36■■□□□ 1.01
C9orf47-202ENST00000375850 PTX3P26022 381 aaPredicted RBP21.36■■□□□ 1.01
C9orf47-202ENST00000375850 IST1P53990 364 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 LIPJQ5W064 366 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 WDR53Q7Z5U6 358 aaPredicted RBP21.36■■□□□ 1.01
C9orf47-202ENST00000375850 LIX1LQ8IVB5 337 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 CTAGE3PQ8IX95 158 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 FAM13CQ8NE31 585 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 HUS1BQ8NHY5 278 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 ATOH8Q96SQ7 321 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 CNPPD1Q9BV87 410 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 WDR41Q9HAD4 459 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 DMRT3Q9NQL9 472 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 PSD3Q9NYI0 1048 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 SPRR3Q9UBC9 169 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 FOXD3Q9UJU5 478 aaPredicted RBP21.36■■□□□ 1.01
C9orf47-202ENST00000375850 ANGPTL3Q9Y5C1 460 aa21.36■■□□□ 1.01
C9orf47-202ENST00000375850 CHCHD2Q9Y6H1 151 aaPredicted RBP21.36■■□□□ 1.01
C9orf47-202ENST00000375850 AHRRA9YTQ3 701 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 SAP18O00422 153 aaKnown RBP21.35■■□□□ 1.01
C9orf47-202ENST00000375850 SYT5O00445 386 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 DVL2O14641 736 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 TP53I11O14683 189 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 OR10H2O60403 315 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 UGDHO60701 494 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 GPR75O95800 540 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 LTA4HP09960 611 aaKnown RBP21.35■■□□□ 1.01
C9orf47-202ENST00000375850 SLC35E2BP0CK96 405 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 KIR2DL3P43628 341 aa21.35■■□□□ 1.01
C9orf47-202ENST00000375850 DLX5P56178 289 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms