RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PSRC1Q6PGN9 363 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 SLC34A3Q8N130 599 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 IL4I1Q96RQ9 567 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
MSH5-204ENST00000375755 SLC29A3Q9BZD2 475 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 TPT1P8Q9HAU6 139 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 CLN6Q9NWW5 311 aa12.31□□□□□ -0.44
MSH5-204ENST00000375755 CIB4A0PJX0 185 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 H7C0S8 307 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 J3KTA2 159 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 PCDH17O14917 1159 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 TPST2O60704 377 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 TPPPO94811 219 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 CLDN9O95484 217 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 CHRM5P08912 532 aaPredicted RBP12.3□□□□□ -0.44
MSH5-204ENST00000375755 FAM157BP0CG42 384 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 CACNG1Q06432 222 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 CYP27C1Q4G0S4 372 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 LIPKQ5VXJ0 399 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 QRFPRQ96P65 431 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 SPATA9Q9BWV2 254 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 RERGLQ9H628 205 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 RBFOX1Q9NWB1 397 aaKnown RBP12.3□□□□□ -0.44
MSH5-204ENST00000375755 FZD4Q9ULV1 537 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 SSR3Q9UNL2 185 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 I3L521 148 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 SOX9P48436 509 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 METAP1P53582 386 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 NFATC2Q13469 925 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 WSCD2Q2TBF2 565 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
MSH5-204ENST00000375755 PAQR6Q6TCH4 344 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 MSANTD1Q6ZTZ1 278 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 RNF175Q8N4F7 328 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 DNAJA4Q8WW22 397 aaPredicted RBP12.3□□□□□ -0.44
MSH5-204ENST00000375755 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 CHST8Q9H2A9 424 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 SUV39H2Q9H5I1 410 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 EVA1BQ9NVM1 165 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 SH3BP4Q9P0V3 963 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 MALT1Q9UDY8 824 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
MSH5-204ENST00000375755 A8MUA0 341 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 MTX2O75431 263 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ARSBP15848 533 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TNNI3P19429 210 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 SERPINA4P29622 427 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ETV3P41162 512 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ALDH9A1P49189 494 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ABRQ12979 859 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 STK11Q15831 433 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 KCTD20Q7Z5Y7 419 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 DUSP18Q8NEJ0 188 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 OR2A12Q8NGT7 310 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 FAM129BQ96TA1 746 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 FTSJ1Q9UET6 329 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ELF5Q9UKW6 265 aaPredicted RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 PROM1O43490 865 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 PLOD3O60568 738 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 LGI1O95970 557 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 POU1F1P28069 291 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 PER3P56645 1201 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 CLDN20P56880 219 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 SELENOWP63302 87 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ARHGEF7Q14155 803 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 HKDC1Q2TB90 917 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 DDI2Q5TDH0 399 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TRIM69Q86WT6 500 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 PHC2Q8IXK0 858 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TOR1AIP2Q8NFQ8 470 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 OR9Q1Q8NGQ5 310 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 UBTD2Q8WUN7 234 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TMEM203Q969S6 136 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 COPS8Q99627 209 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 POLR2J2Q9GZM3 115 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 SLC25A19Q9HC21 320 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 AUP1Q9Y679 476 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 GLYATL1P3A0A0U1RQE8 302 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 FAM240BA0A1B0GVZ2 78 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ZAR1LA6NP61 321 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 STK16O75716 305 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 CTSLP07711 333 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 PIPP12273 146 aaPredicted RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 ATF4P18848 351 aaPredicted RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 CASP9P55211 416 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 RAB25P57735 213 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 SNTA1Q13424 505 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 MFSD13AQ14CX5 517 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ATP13A5Q4VNC0 1218 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ARHGAP15Q53QZ3 475 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 NOXRED1Q6NXP6 359 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms