RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 LIPKQ5VXJ0 399 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 NAGSQ8N159 534 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ACBD7Q8N6N7 88 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ZNF300Q96RE9 604 aaPredicted RBP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 INPP5KQ9BT40 448 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 RMI1Q9H9A7 625 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ATF6P18850 670 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 OR4C11Q6IEV9 310 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ZNF551Q7Z340 670 aaPredicted RBP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 AMIGO1Q86WK6 493 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 CLSTN3Q9BQT9 956 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 MED11Q9P086 117 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 A0A0G2JPF8 293 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 HNRNPCL3B7ZW38 293 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 PCDHGA12O60330 932 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 HNRNPCL4P0DMR1 293 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ENDOUP21128 410 aaKnown RBP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 SLC22A15Q8IZD6 547 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 YIPF7Q8N8F6 280 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 DRAXINQ8NBI3 349 aaPredicted RBP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 PELOQ9BRX2 385 aaKnown RBP18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 WDR37Q9Y2I8 494 aa18.66■□□□□ 0.58
TGFBR1-201ENST00000374990 KIAA0513O60268 411 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 GNSP15586 552 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ARF5P84085 180 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 AMZ1Q400G9 498 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 IFT46Q9NQC8 304 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 APLP1P51693 650 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 RUNX3Q13761 415 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ZNF267Q14586 743 aaPredicted RBP18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 CST6Q15828 149 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 FBXO42Q6P3S6 717 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ABHD11Q8NFV4 315 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ASB11Q8WXH4 323 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 G6PC3Q9BUM1 346 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 SLC22A31A6NKX4 558 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 MITFO75030 526 aaPredicted RBP18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 CKMT1AP12532 417 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 OSMP13725 252 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 NDUFV2P19404 249 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 MAGEA12P43365 314 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 MLLT1Q03111 559 aaPredicted RBP18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 RTL10Q7L3V2 364 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 GKN2Q86XP6 184 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 PLA2G15Q8NCC3 412 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 HCN2Q9UL51 889 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 SLC19A2O60779 497 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 SEMA3DO95025 777 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ARHGAP19Q14CB8 494 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 GALNT10Q86SR1 603 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 RETREG3Q86VR2 466 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 PAPD5Q8NDF8 572 aaKnown RBP18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 FANK1Q8TC84 345 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 LHPPQ9H008 270 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 FBRSQ9HAH7 460 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 TMEM165Q9HC07 324 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 ENAMQ9NRM1 1142 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 SDHAF3Q9NRP4 125 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 LSM1O15116 133 aaKnown RBP18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 GPR149Q86SP6 731 aa18.65■□□□□ 0.58
TGFBR1-201ENST00000374990 HHLA1C9JL84 531 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 PRKYO43930 277 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 CCR7P32248 378 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 RPS26P62854 115 aaKnown RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 MCEMP1Q8IX19 187 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 CEP76Q8TAP6 659 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 RGS17Q9UGC6 210 aaPredicted RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 PGAP2Q9UHJ9 254 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 COL22A1Q8NFW1 1626 aaPredicted RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 FBP2O00757 339 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 JRKO75564 520 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 KLHDC8AQ8IYD2 350 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 GHDCQ8N2G8 530 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 MAL2Q969L2 176 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 MAELQ96JY0 434 aaKnown RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 TM9SF2Q99805 663 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 WACQ9BTA9 647 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 CLMPQ9H6B4 373 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 OR14I1A6ND48 311 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 METTL21EPA6NDL7 271 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 PLOD2O00469 737 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 TNFRSF10BO14763 440 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 AOAHP28039 575 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 CTSOP43234 321 aaPredicted RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 ARRB1P49407 418 aaPredicted RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 DPPA4Q7L190 304 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 C12orf40Q86WS4 652 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 TMIGD2Q96BF3 282 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 GP1BBP13224 206 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 HK3P52790 923 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 PHC1P78364 1004 aa18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 S100A16Q96FQ6 103 aaKnown RBP18.64■□□□□ 0.57
TGFBR1-201ENST00000374990 HMX2A2RU54 273 aa18.63■□□□□ 0.57
TGFBR1-201ENST00000374990 E2F3O00716 465 aa18.63■□□□□ 0.57
TGFBR1-201ENST00000374990 RNGTTO60942 597 aaKnown RBP18.63■□□□□ 0.57
TGFBR1-201ENST00000374990 RPP14O95059 124 aaKnown RBP18.63■□□□□ 0.57
TGFBR1-201ENST00000374990 HTR1AP08908 422 aa18.63■□□□□ 0.57
TGFBR1-201ENST00000374990 RNH1P13489 461 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms