RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 C1GALT1Q9NS00 363 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TXNL4BQ9NX01 149 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 NDUFB11Q9NX14 153 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 EXO1Q9UQ84 846 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ANGPT4Q9Y264 503 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 MTCL1Q9Y4B5 1905 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 OBSL1O75147 1896 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ARHGEF33A8MVX0 844 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 UGDHO60701 494 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TPST2O60704 377 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 MOSPD3O75425 235 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CRYZL1O95825 349 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CKMP06732 381 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RHOP08100 348 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 PSKH1P11801 424 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 MLLT3P42568 568 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 LIMS1P48059 325 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 P2RX3P56373 397 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 PTSQ03393 145 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 EFR3AQ14156 821 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SPIN4Q56A73 249 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 IER5LQ5T953 404 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 GRHL2Q6ISB3 625 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TMPRSS11BQ86T26 416 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SIX5Q8N196 739 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TP53I13Q8NBR0 393 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CREB3L4Q8TEY5 395 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SNAPC3Q92966 411 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF707Q96C28 371 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 YARS2Q9Y2Z4 477 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RPL36Q9Y3U8 105 aaKnown RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ANAPC1Q9H1A4 1944 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SLC35F4A4IF30 521 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 H0YIV9 168 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 APOL3O95236 402 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF8P17098 575 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TNNI3P19429 210 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 WEE1P30291 646 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SDC2P34741 201 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 HMGA2P52926 109 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 C2orf80Q0P641 193 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 FAPQ12884 760 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 KCNC3Q14003 757 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TATDN3Q17R31 274 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 RPS26P11Q5JNZ5 115 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 USP45Q70EL2 814 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CAMKMTQ7Z624 323 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ADGRD2Q7Z7M1 963 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 PEX5LQ8IYB4 626 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 IQCF1Q8N6M8 205 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 ATP6V1C2Q8NEY4 427 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 OR4K3Q96R72 315 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 NELL2Q99435 816 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 BHLHE41Q9C0J9 482 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 TVP23BQ9NYZ1 205 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CARD8Q9Y2G2 431 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 SPIN1Q9Y657 262 aaPredicted RBP10.55□□□□□ -0.72
CCDC40-203ENST00000374877 CLCA3PQ9Y6N3 262 aa10.55□□□□□ -0.72
CCDC40-203ENST00000374877 A0A0G2JMP0 313 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SLC16A5O15375 505 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 OSMP13725 252 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ERP29P30040 261 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CCR2P41597 374 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 MAPK8P45983 427 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GSTM5P46439 218 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 BDKRB1P46663 353 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 XKP51811 444 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 CAV3P56539 151 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF630Q2M218 657 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PLEKHS1Q5SXH7 462 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 MEDAGQ5VYS4 303 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TRIQKQ629K1 86 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ELMOD2Q8IZ81 293 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TDHQ8IZJ6 230 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 NANOGP1Q8N7R0 232 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 GDPD1Q8N9F7 314 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SYT14Q8NB59 555 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 C19orf18Q8NEA5 215 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 C1GALT1C1Q96EU7 318 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 FAM83DQ9H4H8 585 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 COMMD3Q9UBI1 195 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TMPRSS11EQ9UL52 423 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 TMEM202A6NGA9 273 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 PLA2G10O15496 165 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 LRRTM2O43300 516 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 SH3BP5O60239 455 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ICMTO60725 284 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ALPPP05187 535 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 IFI30P13284 250 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 HSD3B1P14060 373 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ENDOUP21128 410 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 HSD3B2P26439 372 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 STK19P49842 368 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 LIM2P55344 173 aa10.54□□□□□ -0.72
CCDC40-203ENST00000374877 RPS26P62854 115 aaKnown RBP10.54□□□□□ -0.72
CCDC40-203ENST00000374877 ZNF763Q0D2J5 394 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms