RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 PDE7AQ13946 482 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 PTGR1Q14914 329 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 CEBPEQ15744 281 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 EXT1Q16394 746 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 TBR1Q16650 682 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 PLAG1Q6DJT9 500 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 TICAM1Q8IUC6 712 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 SAMD14Q8IZD0 417 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 FAM9CQ8IZT9 166 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 CLEC1AQ8NC01 280 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 NFAM1Q8NET5 270 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 CLHC1Q8NHS4 586 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 MTERF3Q96E29 417 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 CNRIP1Q96F85 164 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 RBM18Q96H35 190 aaKnown RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 ZNF681Q96N22 645 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 DGAT2Q96PD7 388 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 ZNF317Q96PQ6 595 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 OR52B2Q96RD2 323 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 CCDC28BQ9BUN5 200 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 REEP4Q9H6H4 257 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 ATP13A2Q9NQ11 1180 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
HSPG2-201ENST00000374673 MED13Q9UHV7 2174 aa14.04□□□□□ -0.16
HSPG2-201ENST00000374673 ANKRD11Q6UB99 2663 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 MYOCOSA0A1B0GUC4 107 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 A0A1W2PS29 197 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 A8MUA0 341 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 MASP2O00187 686 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 VIMP08670 466 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 COX7A2P14406 83 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 PORP16435 677 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 CSNK2A2P19784 350 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 RPL3P39023 403 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 IDH3AP50213 366 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 XKP51811 444 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 DIO3P55073 304 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 CLDN8P56748 225 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 C21orf58P58505 322 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 SLC26A5P58743 744 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 AP2B1P63010 937 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 RHDQ02161 417 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 Q0VFX4 171 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 CHAF1BQ13112 559 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 SPRED3Q2MJR0 410 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 LSM12Q3MHD2 195 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 NXNQ6DKJ4 435 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 R3HCC1LQ7Z5L2 792 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 OR14A16Q8NHC5 309 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 M1APQ8TC57 530 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 PTPMT1Q8WUK0 201 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 DAZLQ92904 295 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 EXOSC8Q96B26 276 aaKnown RBP14.03□□□□□ -0.16
HSPG2-201ENST00000374673 EBF4Q9BQW3 602 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 TRIM55Q9BYV6 548 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 TCF7L2Q9NQB0 619 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 SLC35C2Q9NQQ7 365 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 GIMAP4Q9NUV9 329 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 FGFR1OP2Q9NVK5 253 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 AIG1Q9NVV5 245 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 ATP6V1HQ9UI12 483 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 ENTPD4Q9Y227 616 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 CLCA3PQ9Y6N3 262 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 ZNF780BQ9Y6R6 833 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 DOCK10Q96BY6 2186 aa14.03□□□□□ -0.16
HSPG2-201ENST00000374673 C17orf105B2RV13 164 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 SCAMP2O15127 329 aaKnown RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 POLR3GO15318 223 aaPredicted RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 AKAP10O43572 662 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 OR10H2O60403 315 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 CEACAM4O75871 244 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 LRATO95237 230 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 ATP1B1P05026 303 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 SERPINA7P05543 415 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 DDX5P17844 614 aaKnown RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 PRPS1L1P21108 318 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 HPCAL1P37235 193 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 FEN1P39748 380 aaKnown RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 GPR143P51810 404 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 BTBD16Q32M84 506 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 ZNF750Q32MQ0 723 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 DGAT2L6Q6ZPD8 337 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 RIMKLAQ8IXN7 391 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 KBTBD2Q8IY47 623 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 LRRC25Q8N386 305 aaPredicted RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 GALNT16Q8N428 558 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 MORN4Q8NDC4 146 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 B3GNT7Q8NFL0 401 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 TTC9Q92623 222 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 EXTL1Q92935 676 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 PPWD1Q96BP3 646 aaKnown RBP14.02□□□□□ -0.17
HSPG2-201ENST00000374673 PPCDCQ96CD2 204 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 BRINP2Q9C0B6 783 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 NPHS2Q9NP85 383 aa14.02□□□□□ -0.17
HSPG2-201ENST00000374673 MMP25Q9NPA2 562 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms