RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SLC17A4Q9Y2C5 497 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 PCDHGB1Q9Y5G3 927 aa11.47□□□□□ -0.57
HMGCL-202ENST00000374487 GPR179Q6PRD1 2367 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 TRIM64BA6NI03 449 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 J3KTA2 159 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 RGS10O43665 173 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 KCNJ13O60928 360 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 IFNW1P05000 195 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 BCHEP06276 602 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 EXOC3L2Q2M3D2 409 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 UAP1L1Q3KQV9 507 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 SAXO2Q658L1 398 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 CCDC81Q6ZN84 652 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 SZRD1Q7Z422 152 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 HORMAD2Q8N7B1 307 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 SUMF1Q8NBK3 374 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 OR52E1Q8NGJ3 308 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 PHF10Q8WUB8 498 aaKnown RBP11.46□□□□□ -0.57
HMGCL-202ENST00000374487 SLC38A5Q8WUX1 472 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 FAM122AQ96E09 287 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 PDXPQ96GD0 296 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 MRGPRX1Q96LB2 322 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 PITX2Q99697 317 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 IER2Q9BTL4 223 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 MVB12BQ9H7P6 319 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 DDX31Q9H8H2 851 aaKnown RBP11.46□□□□□ -0.57
HMGCL-202ENST00000374487 GPN2Q9H9Y4 310 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-202ENST00000374487 PLGRKTQ9HBL7 147 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 CCNB1IP1Q9NPC3 277 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 PRDM8Q9NQV8 689 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 POFUT2Q9Y2G5 429 aa11.46□□□□□ -0.57
HMGCL-202ENST00000374487 SDK1Q7Z5N4 2213 aa11.46□□□□□ -0.58
HMGCL-202ENST00000374487 EML5Q05BV3 1969 aa11.46□□□□□ -0.58
HMGCL-202ENST00000374487 IGKV1-8A0A0C4DH67 115 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 LRIT2A6NDA9 550 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TMEM247A6NEH6 219 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PRAMEF25A6NGN4 478 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 MAN1A2O60476 641 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 FOXD2O60548 495 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 GADD45GO95257 159 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CD247P20963 164 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 HTR1BP28222 390 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PKLRP30613 574 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 GPC1P35052 558 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 IGFALSP35858 605 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PLA2G5P39877 138 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CCT3P49368 545 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ENTPD1P49961 510 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ADPRHP54922 357 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CSNK2BP67870 215 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 BNIP3Q12983 259 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TP53BP2Q13625 1128 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 GANABQ14697 944 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 DUSP7Q16829 419 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TMEM35AQ53FP2 167 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 NDUFAF5Q5TEU4 345 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 UBE3DQ7Z6J8 389 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CCDC71Q8IV32 467 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ENTHD1Q8IYW4 607 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 SVOPQ8N4V2 548 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TBC1D19Q8N5T2 526 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 FAR1Q8WVX9 515 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 RAB8BQ92930 207 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 DPH7Q9BTV6 452 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 FAIM2Q9BWQ8 316 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 A4GALTQ9NPC4 353 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 RLIMQ9NVW2 624 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PCDHGA6Q9Y5G7 932 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PCDHGA2Q9Y5H1 932 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ENPP4Q9Y6X5 453 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CFAP54Q96N23 3096 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 KDM1AO60341 852 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 VIPP01282 170 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 STATHP02808 62 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 DRD2P14416 443 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 RHCEP18577 417 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 NR4A1P22736 598 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 KRT20P35900 424 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 MAP2K4P45985 399 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 XCR1P46094 333 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 IDH2P48735 452 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TRA2BP62995 288 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 KCNC4Q03721 635 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 SLC9A5Q14940 896 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 RPS26P11Q5JNZ5 115 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 KIAA1324Q6UXG2 1013 aaKnown RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 Q6ZPB1 254 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-202ENST00000374487 ARHGAP22Q7Z5H3 698 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 WDR5BQ86VZ2 330 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 CROCCP3Q8IVE0 287 aa11.45□□□□□ -0.58
HMGCL-202ENST00000374487 TAGAPQ8N103 731 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms