RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TRIM46Q7Z4K8 759 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 HORMAD2Q8N7B1 307 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 OR4K14Q8NGD5 310 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 PPP1R14CQ8TAE6 165 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 SLC2A12Q8TD20 617 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 CHTF18Q8WVB6 975 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 ZBTB9Q96C00 473 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 NPAS2Q99743 824 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC8-201ENST00000373554 ZNF223Q9UK11 482 aaPredicted RBP11.2□□□□□ -0.62
HDAC8-201ENST00000373554 PSME2Q9UL46 239 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 FIS1Q9Y3D6 152 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 PCDHA9Q9Y5H5 950 aa11.2□□□□□ -0.62
HDAC8-201ENST00000373554 SLC28A1O00337 649 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 PGRMC2O15173 223 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 MAN1A2O60476 641 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 PRAMEF2O60811 474 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 VPS4BO75351 444 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 RSL1D1O76021 490 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 ZFAND5O76080 213 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 WISP1O95388 367 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 CHRNGP07510 517 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SLC35E2P0CK97 266 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SERPINB3P29508 390 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SERPINB4P48594 390 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 ALDH9A1P49189 494 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 GPR143P51810 404 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 MLF1P58340 268 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 BTKQ06187 659 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 TUBA3CQ13748 450 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SPRED3Q2MJR0 410 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 PRR30Q53SZ7 412 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 KANK2Q63ZY3 851 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 RPUSD3Q6P087 351 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SLC48A1Q6P1K1 146 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 GALNT18Q6P9A2 607 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 TUBA3EQ6PEY2 450 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 FAM180AQ6UWF9 173 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 NUDCD3Q8IVD9 361 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 ARMC10Q8N2F6 343 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 THAP3Q8WTV1 239 aaPredicted RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 RIT1Q92963 219 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 MIB2Q96AX9 1013 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 PPWD1Q96BP3 646 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 KLHL29Q96CT2 875 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 SNRNP40Q96DI7 357 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 APIPQ96GX9 242 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 FBXL20Q96IG2 436 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 PKNOX2Q96KN3 472 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 C5orf34Q96MH7 638 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 CNPPD1Q9BV87 410 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 TNFRSF12AQ9NP84 129 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 KCNK9Q9NPC2 374 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 AGPAT4Q9NRZ5 378 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 ANKRD10Q9NXR5 420 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 VPS4AQ9UN37 437 aa11.19□□□□□ -0.62
HDAC8-201ENST00000373554 COPG1Q9Y678 874 aaKnown RBP11.19□□□□□ -0.62
HDAC8-201ENST00000373554 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 BIRC5O15392 142 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 RGS14O43566 566 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ITGA10O75578 1167 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ERAL1O75616 437 aaKnown RBP11.18□□□□□ -0.62
HDAC8-201ENST00000373554 DDAH2O95865 285 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 IL3P08700 152 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ANXA4P09525 319 aaPredicted RBP11.18□□□□□ -0.62
HDAC8-201ENST00000373554 NEFHP12036 1026 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CD46P15529 392 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 GALNSP34059 522 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CD96P40200 585 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 GSTM5P46439 218 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CYB561P49447 251 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ERVK-8P63133 956 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 RAE1P78406 368 aaKnown RBP11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ZNF763Q0D2J5 394 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CASP8Q14790 479 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 OR1C1Q15619 314 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ZNF766Q5HY98 468 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 SH2D4BQ5SQS7 431 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 RNF165Q6ZSG1 346 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 GALNT12Q8IXK2 581 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 DDIASQ8IXT1 998 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CLYBLQ8N0X4 340 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 OR5L2Q8NGL0 311 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 OR8K3Q8NH51 312 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 CDC26Q8NHZ8 85 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 AGR3Q8TD06 166 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ZNF721Q8TF20 911 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 UCN3Q969E3 161 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 TM4SF18Q96CE8 201 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 METTL2AQ96IZ6 378 aaKnown RBP11.18□□□□□ -0.62
HDAC8-201ENST00000373554 EBPLQ9BY08 206 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ASF1BQ9NVP2 202 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 ARGLU1Q9NWB6 273 aaPredicted RBP11.18□□□□□ -0.62
HDAC8-201ENST00000373554 SIRT5Q9NXA8 310 aa11.18□□□□□ -0.62
HDAC8-201ENST00000373554 LRFN1Q9P244 771 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms