RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 INO80EQ8NBZ0 244 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 C7orf50Q9BRJ6 194 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 TM9SF3Q9HD45 589 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 KLRF1Q9NZS2 232 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR6C74A6NCV1 312 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 K7ERQ8 282 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 RLN2P04090 185 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 GNALP38405 381 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 GDF5P43026 501 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 PRAMEF17Q5VTA0 474 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 RPLP0P6Q8NHW5 317 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 MMP27Q9H306 513 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 MVB12BQ9H7P6 319 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 P2RX2Q9UBL9 471 aa12.79□□□□□ -0.36
RAPGEF1-201ENST00000372189 SCDO00767 359 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADAM10O14672 748 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 EBLN1P0CF75 366 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DNAJB13P59910 316 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 UFM1P61960 85 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 RPS13P62277 151 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 PMPCAQ10713 525 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM110BQ8TC76 370 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 TSACCQ96A04 125 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 BIRC8Q96P09 236 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 MKKSQ9NPJ1 570 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 LYARQ9NX58 379 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ACTR10Q9NZ32 417 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC35F4A4IF30 521 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DNAJB6O75190 326 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 CREG1O75629 220 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DNAJB5O75953 348 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 RABIFP47224 123 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SMSP52788 366 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 FAM214AQ32MH5 1076 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 Q3ZCU0 254 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 KIAA1614Q5VZ46 1190 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 STRA6Q9BX79 667 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 UCK2Q9BZX2 261 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 COPZ2Q9P299 210 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 CDRT1O95170 752 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ARSAP15289 507 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 CXCR1P25024 350 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 HNRNPKP61978 463 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF782Q6ZMW2 699 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 IL4I1Q96RQ9 567 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 Q9N2J8 555 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SDHAF2Q9NX18 166 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 KHNYNO15037 678 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC16A5O15375 505 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 H1F0P07305 194 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DGKQP52824 942 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ENPP2Q13822 863 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 GPR68Q15743 365 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 MTFR2Q6P444 385 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 GLIS1Q8NBF1 620 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 KLHDC9Q8NEP7 349 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR4K17Q8NGC6 315 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLC17A9Q9BYT1 436 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 PLEKHA1Q9HB21 404 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 RBMXL2O75526 392 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 SLITRK5O94991 958 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 APOC3P02656 99 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ADRB3P13945 408 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 RAB3BP20337 219 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 AP2S1P53680 142 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 RAB39AQ14964 217 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DECR1Q16698 335 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM125Q96AQ2 219 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 TGM7Q96PF1 710 aa12.78□□□□□ -0.36
RAPGEF1-201ENST00000372189 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 DLGAP1O14490 977 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 YKT6O15498 198 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR1I1O60431 355 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 C7P10643 843 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 HTR2AP28223 471 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 HLA-FP30511 346 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF423Q2M1K9 1284 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZNF181Q2M3W8 571 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 CMPK2Q5EBM0 449 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 EMC10Q5UCC4 262 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 C12orf40Q86WS4 652 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 OR2L3Q8NG85 312 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 ZFPM2Q8WW38 1151 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 PEX13Q92968 403 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 TAAR8Q969N4 342 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 TMEM80Q96HE8 168 aa12.77□□□□□ -0.36
RAPGEF1-201ENST00000372189 A0A096LPI6 279 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 GRXCR1A8MXD5 290 aa12.77□□□□□ -0.37
RAPGEF1-201ENST00000372189 HLA-DPB1P04440 258 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms