RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 FCAMRQ8WWV6 532 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 PPP1R14AQ96A00 147 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 NAP1L6A6NFF2 107 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 TSPAN6O43657 245 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 TLL1O43897 1013 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 RAB40BQ12829 278 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 SH2D5Q6ZV89 423 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 GON7Q9BXV9 100 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 MVB12BQ9H7P6 319 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ADAP2Q9NPF8 381 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 EMC8O43402 210 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 SLC11A1P49279 550 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF81P51508 661 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 CREB5Q02930 508 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ASB15Q8WXK1 588 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 POLE4Q9NR33 117 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 KLK4Q9Y5K2 254 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 BPIP17213 487 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 HK3P52790 923 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF782Q6ZMW2 699 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 MMAAQ8IVH4 418 aaKnown RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 THAP6Q8TBB0 222 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 MROQ9BYG7 248 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 ELL3Q9HB65 397 aaPredicted RBP11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
CDC42BPA-202ENST00000366764 HYKKA2RU49 373 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR2AT4A6NND4 320 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PLD2O14939 933 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ELNP15502 786 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 KCNA5P22460 613 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ERVK-21P61565 698 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 SELPLGQ14242 412 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 LRRC32Q14392 662 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 KIAA1324Q6UXG2 1013 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 COMMD6Q7Z4G1 85 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 C6orf120Q7Z4R8 191 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 A0A1W2PRQ8 180 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 TUBB3Q13509 450 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 DPH2Q9BQC3 489 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 KXD1Q9BQD3 176 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 IL26Q9NPH9 171 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 TYRP14679 529 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PIGFQ07326 219 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF789Q5FWF6 425 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 C22orf42Q6IC83 251 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 GPER1Q99527 375 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ACPTQ9BZG2 426 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 TDP1Q9NUW8 608 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 UNC119BA6NIH7 251 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ALPPL2P10696 532 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 NXPE4Q6UWF7 544 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 LACC1Q8IV20 430 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PNLDC1Q8NA58 520 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PROKR2Q8NFJ6 384 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR56A3Q8NH54 315 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 C3orf30Q96M34 536 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CREBL2O60519 120 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 RGNQ15493 299 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 UGT3A2Q3SY77 523 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 RNASE12Q5GAN4 147 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 NLRP8Q86W28 1048 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 OR14C36Q8NHC7 312 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 OLIG1Q8TAK6 271 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 SECISBP2Q96T21 854 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 MCHR1Q99705 422 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZBTB20Q9HC78 741 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PRLP01236 227 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CHRM5P08912 532 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZNF823P16415 610 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 IL12BP29460 328 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 CSNK1DP48730 415 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 TSPAN5P62079 268 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 FGL1Q08830 312 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 TP53INP2Q8IXH6 220 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 HSFX1Q9UBD0 423 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 A0A1B0GVG6 124 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PRAF2O60831 178 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 UGT2B10P36537 528 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 PREPP48147 710 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 A0A0G2JPF8 293 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 HNRNPCL3B7ZW38 293 aa11.28□□□□□ -0.6
CDC42BPA-202ENST00000366764 HNRNPCL4P0DMR1 293 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms