RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SLITRK5O94991 958 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SOX18P35713 384 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 DEFA1P59665 94 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 DEFA3P59666 94 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CSNK2BP67870 215 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 GPR50Q13585 617 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ZNF750Q32MQ0 723 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ATAT1Q5SQI0 421 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 FAM71E1Q6IPT2 247 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TUBA3EQ6PEY2 450 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 FAM131AQ6UXB0 335 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TMPRSS11AQ6ZMR5 421 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 HTR3DQ70Z44 454 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SFTPA1Q8IWL2 248 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 BTN2A2Q8WVV5 523 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 GLYATL1Q969I3 302 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 EFHD2Q96C19 240 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 ARSGQ96EG1 525 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CDCA4Q9BXL8 241 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 MIXL1Q9H2W2 232 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CUEDC1Q9NWM3 386 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 SLC25A13Q9UJS0 675 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 CFL2Q9Y281 166 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 KLK4Q9Y5K2 254 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ANHXE9PGG2 379 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SCAMP1O15126 338 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TBX6O95947 436 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 TYRP14679 529 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ELAVL4P26378 380 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TCEAL8Q8IYN2 117 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 GATAD2BQ8WXI9 593 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 KLK6Q92876 244 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 PHOX2BQ99453 314 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 SMAD5Q99717 465 aaKnown RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 BHLHE41Q9C0J9 482 aaPredicted RBP10.05□□□□□ -0.8
SMC3-201ENST00000361804 RACGAP1Q9H0H5 632 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 BRF2Q9HAW0 419 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TM7SF3Q9NS93 570 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 TMEM98Q9Y2Y6 226 aa10.05□□□□□ -0.8
SMC3-201ENST00000361804 KPNA3O00505 521 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 SLC16A5O15375 505 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 MRPS14O60783 128 aaKnown RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 ATG13O75143 517 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 SERPIND1P05546 499 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 ARAFP10398 606 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 CD72P21854 359 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 RNF144AP50876 292 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 PRKAG1P54619 331 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 RAB25P57735 213 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 NTHL1P78549 312 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 TAP2Q03519 686 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 TCEA2Q15560 299 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 LY6G5CQ5SRR4 150 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 TRIM40Q6P9F5 258 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 LYPD8Q6UX82 237 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 FAM83HQ6ZRV2 1179 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 FAM46DQ8NEK8 389 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 OR5AR1Q8NGP9 310 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 SERHL2Q9H4I8 314 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 THSD1Q9NS62 852 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 ATP6V1HQ9UI12 483 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 PPIL1Q9Y3C6 166 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 MEIOCA2RUB1 952 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 CH25HO95992 272 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 MSL3P1P0C860 447 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 XPAP23025 273 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 VIPR1P32241 457 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 SDC2P34741 201 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 XKP51811 444 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 WDR5P61964 334 aaKnown RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 RPS25P62851 125 aaKnown RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 ZFP69Q49AA0 526 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 CLEC12AQ5QGZ9 265 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 C19orf48Q6RUI8 117 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 EGLN3Q9H6Z9 239 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 SLC25A19Q9HC21 320 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 ANKHQ9HCJ1 492 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 MKLN1Q9UL63 735 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 DOCK8Q8NF50 2099 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 A0A1W2PQL4 384 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 UGDHO60701 494 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 ELFN1P0C7U0 828 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 RECQLP46063 649 aaPredicted RBP10.04□□□□□ -0.8
SMC3-201ENST00000361804 UBE3AQ05086 875 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
SMC3-201ENST00000361804 CAMKMTQ7Z624 323 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms