RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DRICH1Q6PGQ1 229 aaPredicted RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR4C15Q8NGM1 316 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR2L2Q8NH16 312 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 FAM155AB1AL88 458 aaPredicted RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 BRINP1O60477 761 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 LHCGRP22888 699 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 CERS1P27544 350 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 SPINT3P49223 89 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ATAD3CQ5T2N8 411 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF550Q7Z398 422 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 IQCKQ8N0W5 287 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 GPR22Q99680 433 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 RBM24Q9BX46 236 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 SORBS1Q9BX66 1292 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 BHMG1C9JSJ3 638 aaPredicted RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 PROM1O43490 865 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 KIAA1211LQ6NV74 962 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 NXPE4Q6UWF7 544 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 LMNTD1Q8N9Z9 388 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 POGLUT1Q8NBL1 392 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR56A3Q8NH54 315 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ULBP3Q9BZM4 244 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 NUMBLQ9Y6R0 609 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 MEN1O00255 615 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 EIF2S3P41091 472 aaKnown RBP19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 UBE2UQ5VVX9 321 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 MAMDC4Q6UXC1 1216 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 PAQR7Q86WK9 346 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 MND1Q9BWT6 205 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF350Q9GZX5 532 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 MS4A12Q9NXJ0 267 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZIM2Q9NZV7 527 aa19.41■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF33BQ06732 778 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 CDK10Q15131 360 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 FRMD7Q6ZUT3 714 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 KLHDC8AQ8IYD2 350 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ASB12Q8WXK4 309 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF689Q96CS4 500 aaPredicted RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 FOXN4Q96NZ1 517 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 CTRCQ99895 268 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 NARSO43776 548 aaKnown RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ANXA8P13928 327 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF28P17035 718 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PCLAFQ15004 111 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 DEFB123Q8N688 67 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 RDH12Q96NR8 316 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PCDHGB1Q9Y5G3 927 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR14I1A6ND48 311 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PVRP15151 417 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 TNFRSF1BP20333 461 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 OR52P1PQ8NH57 321 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLC9B1P1A6NJY1 282 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 RAB36O95755 333 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 MALLQ13021 153 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 CEP76Q8TAP6 659 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF700Q9H0M5 742 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 SLAMF7Q9NQ25 335 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 TRIM36Q9NQ86 728 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 MEMO1Q9Y316 297 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 TNFSF12O43508 249 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 GDF1P27539 372 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 DIO3P55073 304 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 MEP1AQ16819 746 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 LRRC37A5PQ49AS3 106 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF221Q9UK13 617 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 NOP16Q9Y3C1 178 aaKnown RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PORP16435 677 aaPredicted RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 IL4RP24394 825 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 RAB33AQ14088 237 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 LIPJQ5W064 366 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 REEP3Q6NUK4 255 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 ZNF784Q8NCA9 323 aaPredicted RBP19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 OSTF1Q92882 214 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 RDH14Q9HBH5 336 aa19.4■□□□□ 0.7
CDC42BPB-201ENST00000361246 PLOD2O00469 737 aa19.39■□□□□ 0.7
CDC42BPB-201ENST00000361246 ERCC1P07992 297 aaPredicted RBP19.39■□□□□ 0.7
CDC42BPB-201ENST00000361246 GSK3BP49841 420 aa19.39■□□□□ 0.7
CDC42BPB-201ENST00000361246 GTF2IRD2BQ6EKJ0 949 aa19.39■□□□□ 0.7
CDC42BPB-201ENST00000361246 GTF2IRD2Q86UP8 949 aa19.39■□□□□ 0.7
CDC42BPB-201ENST00000361246 A0A0A6YYC8 382 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 I3L1I5 382 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 S100A9P06702 114 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 SLC2A2P11168 524 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 ZNF775Q96BV0 537 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 SLC25A44Q96H78 314 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 SLC6A7Q99884 636 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 KCND1Q9NSA2 647 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 TEX13CA0A0J9YWL9 993 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 NUAK1O60285 661 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 ACVR1BP36896 505 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 CSNK1EP49674 416 aaKnown RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 GALNT1Q10472 559 aaPredicted RBP19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 SQSTM1Q13501 440 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 TUBB3Q13509 450 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 CYP1B1Q16678 543 aa19.39■□□□□ 0.69
CDC42BPB-201ENST00000361246 GALNT6Q8NCL4 622 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms