RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CD63P08962 238 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 KCNC1P48547 511 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 ART1P52961 327 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 UFM1P61960 85 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 UBXN2BQ14CS0 331 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 C6orf141Q5SZD1 244 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 ASRGL1Q7L266 308 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 ESAMQ96AP7 390 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 NPIPA7E9PJI5 369 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 NPIPA8P0DM63 369 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 ERVK-16P61578 105 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 HNRNPDQ14103 355 aaKnown RBP12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 GBX1Q14549 363 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 TSTD2Q5T7W7 516 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 CEACAM19Q7Z692 300 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 PROKR1Q8TCW9 393 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 BTF3L4Q96K17 158 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 SAMD11Q96NU1 681 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 DLG5Q8TDM6 1919 aa12.71□□□□□ -0.38
SRGAP3-201ENST00000360413 MSI1O43347 362 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 DENRO43583 198 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SC5DO75845 299 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OAS1P00973 400 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 PXKQ7Z7A4 578 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 DPPA2Q7Z7J5 298 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CHDHQ8NE62 594 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OR13J1Q8NGT2 312 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC29A3Q9BZD2 475 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TFB2MQ9H5Q4 396 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MPPED1O15442 326 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 LATO43561 262 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 RNF13O43567 381 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CYP1B1Q16678 543 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ADGRA1Q86SQ6 560 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC17A6Q9P2U8 582 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 AGLP35573 1532 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 A0A1B0GVG6 124 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 AGPAT2O15120 278 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CCL16O15467 120 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 HCRTR2O43614 444 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM189A1O60320 539 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 JMJD7P0C870 316 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CHRNA4P43681 627 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TAS2R39P59534 338 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ACTBP60709 375 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ACTG1P63261 375 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 PMS2P3Q13401 168 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 PRAMEF14Q5SWL7 426 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CEACAM20Q6UY09 585 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CMTM1Q8IZ96 169 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CDCA5Q96FF9 252 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 FZD3Q9NPG1 666 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 A0A1W2PPK0 400 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 APBB3O95704 486 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 JAM2P57087 298 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CAPSQ13938 189 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 AMZ1Q400G9 498 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CATSPERGQ6ZRH7 1159 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC22A8Q8TCC7 542 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MYOCQ99972 504 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TUBB1Q9H4B7 451 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ZDHHC18Q9NUE0 388 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 GLSO94925 669 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 IL1AP01583 271 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 CD52P31358 61 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 DPYSL2Q16555 572 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 GPR149Q86SP6 731 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OR4Q3Q8NH05 313 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 FANK1Q8TC84 345 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 HAS1Q92839 578 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SPIN2AQ99865 258 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SPIN2BQ9BPZ2 258 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TP53TG5Q9Y2B4 290 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OR7A17O14581 309 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ENPP3O14638 875 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 GJB1P08034 283 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MRPL3P09001 348 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OPRL1P41146 370 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MLLT10P55197 1068 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 NIPAL4Q0D2K0 466 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 OR5L2Q8NGL0 311 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 SETD7Q8WTS6 366 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 MRI1Q9BV20 369 aa12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 ZCCHC3Q9NUD5 404 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-201ENST00000360413 TEX10Q9NXF1 929 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms