RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GPR68Q15743 365 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 BCL7AQ4VC05 210 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 TPRG1LQ5T0D9 272 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 FAM71E1Q6IPT2 247 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 FAM92BQ6ZTR7 304 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 IKBIPQ70UQ0 350 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 ANKRD13BQ86YJ7 626 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 OR4N5Q8IXE1 308 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 ENTHD1Q8IYW4 607 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 NATD1Q8N6N6 113 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 CLIP3Q96DZ5 547 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SLC17A9Q9BYT1 436 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 GPN2Q9H9Y4 310 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 CRNNQ9UBG3 495 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 SEC16AO15027 2179 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 URB1O60287 2271 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 URADA6NGE7 173 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 RNGTTO60942 597 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 GP2P55259 537 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 KCNJ10P78508 379 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 GINS1Q14691 196 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 IRF4Q15306 451 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 PDZK1Q5T2W1 519 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SMARCD3Q6STE5 483 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SLC22A16Q86VW1 577 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 PARGQ86W56 976 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SLC38A5Q8WUX1 472 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 COQ8BQ96D53 544 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 CFHR5Q9BXR6 569 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 EPHX3Q9H6B9 360 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 ZBTB20Q9HC78 741 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 NECTIN3Q9NQS3 549 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 TAS2R16Q9NYV7 291 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 MAT2BQ9NZL9 334 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 MARK1Q9P0L2 795 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 RPL36Q9Y3U8 105 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 PLEKHM1Q9Y4G2 1056 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 CKAP5Q14008 2032 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 GFRA2O00451 464 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 PRSS23O95084 383 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 JUNBP17275 347 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 PRPH2P23942 346 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 CLDN2P57739 230 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 RAE1P78406 368 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 GRSF1Q12849 480 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSU72-202ENST00000359060 WDR53Q7Z5U6 358 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 C10orf53Q8N6V4 93 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 SH3YL1Q96HL8 342 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 MARCH7Q9H992 704 aa10.63□□□□□ -0.71
SSU72-202ENST00000359060 KRCC1Q9NPI7 259 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 MBNL1Q9NR56 388 aaKnown RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 SPIN1Q9Y657 262 aaPredicted RBP10.63□□□□□ -0.71
SSU72-202ENST00000359060 WASHC1A8K0Z3 465 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 TFECO14948 347 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 SNX4O95219 450 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 ADH1BP00325 375 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 POLR2CP19387 275 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 CXCR4P61073 352 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 ILF3Q12906 894 aaKnown RBP eCLIP10.62□□□□□ -0.71
SSU72-202ENST00000359060 DEFB134Q4QY38 66 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 WASH2PQ6VEQ5 465 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 ZNF765Q7L2R6 523 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 ADGRD2Q7Z7M1 963 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 OR5K2Q8NHB8 316 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 TSACCQ96A04 125 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 ASB16Q96NS5 453 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 OR51E2Q9H255 320 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 MGAT4BQ9UQ53 548 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 PCDHGA2Q9Y5H1 932 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 TMCC2O75069 709 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 BMP7P18075 431 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 HOXA9P31269 272 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 SLC35A2P78381 396 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 C11orf91Q3C1V1 193 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 B3GNT7Q8NFL0 401 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 OR52E4Q8NGH9 312 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 C9orf43Q8TAL5 461 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 SLC6A17Q9H1V8 727 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 TAAR2Q9P1P5 351 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 SNX7Q9UNH6 387 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 GSTK1Q9Y2Q3 226 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 TSC22D4Q9Y3Q8 395 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 CASP8AP2Q9UKL3 1982 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 FAM170BA6NMN3 283 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 PPM1DO15297 605 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 LAMP2P13473 410 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 CERS1P27544 350 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 GTF2E2P29084 291 aaKnown RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 TAB1Q15750 504 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 RSBN1Q5VWQ0 802 aaPredicted RBP10.62□□□□□ -0.71
SSU72-202ENST00000359060 XAF1Q6GPH4 301 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 FRMPD2BQ6IN97 320 aa10.62□□□□□ -0.71
SSU72-202ENST00000359060 KIAA1161Q6NSJ0 714 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms