RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 COPS7AQ9UBW8 275 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 HAS3O00219 553 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GLUD1P00367 558 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ALDOBP05062 364 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 AKR1A1P14550 325 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 IL4RP24394 825 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SLC6A6P31641 620 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LUMP51884 338 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LASP1Q14847 261 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CDNFQ49AH0 187 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 WASH2PQ6VEQ5 465 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 C2orf73Q8N5S3 287 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 C7orf57Q8NEG2 295 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OR13C4Q8NGS5 318 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CLDN24A6NM45 220 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 EMX1Q04741 257 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SIX1Q15475 284 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GPR68Q15743 365 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LINGO4Q6UY18 593 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF565Q8N9K5 539 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 KCNJ9Q92806 393 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 FEVQ99581 238 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 DHRS4Q9BTZ2 278 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 GIMAP2Q9UG22 337 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SPATA31A5Q5VU36 1347 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SPATA31A7Q8IWB4 1347 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF821O75541 412 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CFHP08603 1231 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 AGTR2P50052 363 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 OLIG2Q13516 323 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 TDGQ13569 410 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LINC00299Q6ZSB3 139 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LRRC28Q86X40 367 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 WASH6PQ9NQA3 447 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 AIG1Q9NVV5 245 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 HIF3AQ9Y2N7 669 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 HEBP2Q9Y5Z4 205 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ZFP37Q9Y6Q3 630 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 LOC285095A0A1B0GVY8 99 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 TXNL1O43396 289 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 C6orf47O95873 294 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 HCKP08631 526 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SLC6A9P48067 706 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 CAMLGP49069 296 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 DNAAF1Q8NEP3 725 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ACDQ96AP0 544 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 P2RY13Q9BPV8 354 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 THAP7Q9BT49 309 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 MRPS30Q9NP92 439 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SDR39U1Q9NRG7 319 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 PCDHB14Q9Y5E9 798 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 POP4O95707 220 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 JUNP05412 331 aaKnown RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ETV4P43268 484 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 BDH1Q02338 343 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 MLLT1Q03111 559 aaPredicted RBP8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SOWAHAQ2M3V2 549 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 FRS2Q8WU20 508 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 L3HYPDHQ96EM0 354 aa8.42□□□□□ -1.06
COL6A6-201ENST00000358511 FOCADQ5VW36 1801 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 HES5Q5TA89 166 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 NOXRED1Q6NXP6 359 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TRMT10AQ8TBZ6 339 aaKnown RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 GJD4Q96KN9 370 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 P2RX7Q99572 595 aaKnown RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TRBV2A0A0J9YWF9 115 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 NEDD8-MDP1E9PL57 170 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ITGA5P08648 1049 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CSNK2A2P19784 350 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 FRKP42685 505 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 HERV-K104P61576 105 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TBCEQ15813 527 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 GLT8D1Q68CQ7 371 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 MS4A15Q8N5U1 240 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF283Q8N7M2 679 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CNN2Q99439 309 aaKnown RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 MRI1Q9BV20 369 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 HDHD5Q9BXW7 423 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PCYT1BQ9Y5K3 369 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TREHO43280 583 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 DNAJB6O75190 326 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TFAP2AP05549 437 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ALPPL2P10696 532 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 CD1DP15813 335 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 DRD5P21918 477 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 GGT5P36269 586 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 PTH2RP49190 550 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF157P51786 506 aaPredicted RBP8.41□□□□□ -1.06
COL6A6-201ENST00000358511 STEAP3Q658P3 488 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 TMPRSS12Q86WS5 348 aa8.41□□□□□ -1.06
COL6A6-201ENST00000358511 KLBQ86Z14 1044 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms