RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IRF3Q14653 427 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 SPANXN2Q5MJ10 180 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 CRELD1Q96HD1 420 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF717Q9BY31 904 aaPredicted RBP18.57■□□□□ 0.56
COL13A1-201ENST00000354547 POLR2J3Q9H1A7 115 aaKnown RBP18.57■□□□□ 0.56
COL13A1-201ENST00000354547 MVB12BQ9H7P6 319 aa18.57■□□□□ 0.56
COL13A1-201ENST00000354547 CCRL2O00421 344 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 HMGN4O00479 90 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 NME6O75414 186 aaPredicted RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 ITGB7P26010 798 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 ELAVL4P26378 380 aaKnown RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 BSGP35613 385 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 SOX6P35712 828 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 CCT3P49368 545 aaKnown RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 MXD1Q05195 221 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 EIF4HQ15056 248 aaKnown RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF770Q6IQ21 691 aaPredicted RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 CASP12Q6UXS9 341 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF367Q7RTV3 350 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 CXorf40AQ8TE69 158 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 KLK6Q92876 244 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 C17orf62Q9BQA9 187 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 AIF1LQ9BQI0 150 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 MARK1Q9P0L2 795 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 POU2F3Q9UKI9 436 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 MTCL1Q9Y4B5 1905 aaKnown RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 CLCNKAP51800 687 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 XKP51811 444 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 SELENBP1Q13228 472 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 HEPACAMQ14CZ8 416 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 UNC5DQ6UXZ4 953 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 COMTD1Q86VU5 262 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 OR8H2Q8N162 312 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 SETD7Q8WTS6 366 aaKnown RBP18.56■□□□□ 0.56
COL13A1-201ENST00000354547 NEURL3Q96EH8 262 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 PRR14Q9BWN1 585 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 EHD3Q9NZN3 535 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 PCDHGB6Q9Y5F9 930 aa18.56■□□□□ 0.56
COL13A1-201ENST00000354547 TAF4O00268 1085 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 LCMT2O60294 686 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 H1F0P07305 194 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ELOAQ14241 798 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 HNRNPA1L2Q32P51 320 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SAXO2Q658L1 398 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 LCTLQ6UWM7 567 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 PDZD3Q86UT5 571 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 DCUN1D3Q8IWE4 304 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SLC7A13Q8TCU3 470 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 OR5P2Q8WZ92 322 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 MS4A8Q9BY19 250 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 TRPM6Q9BX84 2022 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SMIM30A4D0T7 59 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 HEPACAM2A8MVW5 462 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SLC9A3R1O14745 358 aaPredicted RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 CAPN5O15484 640 aaPredicted RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ERAL1O75616 437 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 NR2F1P10589 423 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 OSMP13725 252 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF234Q14588 700 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF181Q2M3W8 571 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 IKBIPQ70UQ0 350 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SMPDL3AQ92484 453 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 TMEM203Q969S6 136 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ITPKCQ96DU7 683 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 TREX2Q9BQ50 279 aaPredicted RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ANKHQ9HCJ1 492 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SNTG1Q9NSN8 517 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ANKMY1Q9P2S6 941 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 DEC1Q9P2X7 70 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 REV1Q9UBZ9 1251 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 OR1A2Q9Y585 309 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 HEATR5BQ9P2D3 2071 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 IGLON5A6NGN9 336 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 RFXAPO00287 272 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 AZGP1P25311 298 aaKnown RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF750Q32MQ0 723 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 PNCKQ6P2M8 343 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ATCAYQ86WG3 371 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 ZNF514Q96K75 400 aaPredicted RBP18.55■□□□□ 0.56
COL13A1-201ENST00000354547 CDCA4Q9BXL8 241 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SERHL2Q9H4I8 314 aa18.55■□□□□ 0.56
COL13A1-201ENST00000354547 SAGE2PA6NJ88 616 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 LOC110117498-PIK3R3F6TDL0 507 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 TLX2O43763 284 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-201ENST00000354547 PCDH8O95206 1070 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 ADH1CP00326 375 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 TMC5Q6UXY8 1006 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 OPALINQ96PE5 141 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 QRSL1Q9H0R6 528 aaKnown RBP18.54■□□□□ 0.56
COL13A1-201ENST00000354547 LHX9Q9NQ69 397 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 SIRT3Q9NTG7 399 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-201ENST00000354547 TBC1D3BA6NDS4 549 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 EPHX1P07099 455 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 C8orf89P0DMQ9 161 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 CD72P21854 359 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 CCBE1Q6UXH8 406 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-201ENST00000354547 CELF2-AS1Q8N7Q2 184 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 OTUB2Q96DC9 234 aa18.54■□□□□ 0.56
COL13A1-201ENST00000354547 ASPNQ9BXN1 380 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms