RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FAM129CQ86XR2 697 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 GPR65Q8IYL9 337 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 FAM181AQ8N9Y4 354 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 HCAR2Q8TDS4 363 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 OR2AG1Q9H205 316 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 LINC00597Q9H2U6 94 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 N6AMT1Q9Y5N5 214 aa23.29■■□□□ 1.32
CPNE1-202ENST00000352393 H3BN98 237 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 IDH3BO43837 385 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 B4GALT2O60909 372 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 TBX6O95947 436 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 KCNJ5P48544 419 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 WDR5P61964 334 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 BAK1Q16611 211 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 LY6G5CQ5SRR4 150 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 LILRA6Q6PI73 481 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 DEF8Q6ZN54 512 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 RBM45Q8IUH3 476 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 PHC2Q8IXK0 858 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 SETD7Q8WTS6 366 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 LRIG1Q96JA1 1093 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 ZCCHC2Q9C0B9 1178 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 POLR2J2Q9GZM3 115 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 ZBP1Q9H171 429 aa23.28■■□□□ 1.32
CPNE1-202ENST00000352393 POLR2J3Q9H1A7 115 aaKnown RBP23.28■■□□□ 1.32
CPNE1-202ENST00000352393 WWP2O00308 870 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 AP3D1O14617 1153 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 PDPK1O15530 556 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SPINT1O43278 529 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 CYP17A1P05093 508 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 DDX5P17844 614 aaKnown RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 LARS2Q15031 903 aaKnown RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 ARMC4Q5T2S8 1044 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 PAQR6Q6TCH4 344 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 CCDC149Q6ZUS6 474 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 BCDIN3DQ7Z5W3 292 aaKnown RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 TCEANCQ8N8B7 351 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 RAB8BQ92930 207 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF354BQ96LW1 612 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 TEFMQ96QE5 360 aaKnown RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 TPK1Q9H3S4 243 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SEMA3GQ9NS98 782 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SIRT3Q9NTG7 399 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 HCFC1R1Q9NWW0 138 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 ANKDD1BA6NHY2 528 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 PI15O43692 258 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SEMA3DO95025 777 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 IL7P13232 177 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 ACADLP28330 430 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 NNMTP40261 264 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 HEPACAMQ14CZ8 416 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 LCTLQ6UWM7 567 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 TRMT11Q7Z4G4 463 aaKnown RBP23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SLAIN1Q8ND83 568 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 IL17FQ96PD4 163 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SNX18Q96RF0 628 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 WFDC6Q9BQY6 131 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 ABCG4Q9H172 646 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 NEUROD4Q9HD90 331 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 SSR3Q9UNL2 185 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 CMAHPQ9Y471 501 aa23.27■■□□□ 1.32
CPNE1-202ENST00000352393 PRRC2BQ5JSZ5 2229 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 K7ESM1 405 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 HMGN4O00479 90 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 MMP20O60882 483 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 TGM4P49221 684 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 ALDH6A1Q02252 535 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 RUNX1T1Q06455 604 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 RAB43Q86YS6 212 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 REM2Q8IYK8 340 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 KRT78Q8N1N4 520 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 PSD4Q8NDX1 1056 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 SLC7A13Q8TCU3 470 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 TM4SF18Q96CE8 201 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 TCEAL4Q96EI5 215 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 CFHR5Q9BXR6 569 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 ZDHHC5Q9C0B5 715 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 AHSPQ9NZD4 102 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 MYL12BO14950 172 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 CCL16O15467 120 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 AZGP1P25311 298 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 DDOSTP39656 456 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 MAPK12P53778 367 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 MANFP55145 182 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 C1DQ13901 141 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 PRR23CQ6ZRP0 262 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 C6orf120Q7Z4R8 191 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 ZNF547Q8IVP9 402 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 NATD1Q8N6N6 113 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 CELF5Q8N6W0 485 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 OR9Q1Q8NGQ5 310 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 SLC25A46Q96AG3 418 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 ST6GAL2Q96JF0 529 aa23.26■■□□□ 1.31
CPNE1-202ENST00000352393 DIMT1Q9UNQ2 313 aaKnown RBP23.26■■□□□ 1.31
CPNE1-202ENST00000352393 A0A1W2PQ09 198 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 FAM172BPA6NC97 362 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 ANHXE9PGG2 379 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 FRKP42685 505 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-202ENST00000352393 DEFB103AP81534 67 aa23.25■■□□□ 1.31
CPNE1-202ENST00000352393 KHDRBS2Q5VWX1 349 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms