RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FRS3O43559 492 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 IMPA1P29218 277 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 XCR1P46094 333 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 OR1D4P47884 311 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 SLC6A9P48067 706 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 KIR2DS5Q14953 304 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NPTX1Q15818 432 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 P4HA3Q7Z4N8 544 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 DTNBP1Q96EV8 351 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 BHLHE41Q9C0J9 482 aaPredicted RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 SDR39U1Q9NRG7 319 aaPredicted RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 GEMIN8Q9NWZ8 242 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 POFUT2Q9Y2G5 429 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NPIPA5A0A0B4J1W7 369 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 IRGMA1A4Y4 181 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NPIPA7E9PJI5 369 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 SLC30A4O14863 429 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 AQP9O43315 295 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 H6PDO95479 791 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NPIPA8P0DM63 369 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 ITGA3P26006 1051 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 SLC14A2Q15849 920 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 RNASE11Q8TAA1 199 aaKnown RBP13.05□□□□□ -0.32
SMC6-201ENST00000351948 TSPEARQ8WU66 669 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 NKD1Q969G9 470 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 PELI2Q9HAT8 420 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 IL20RAQ9UHF4 553 aa13.05□□□□□ -0.32
SMC6-201ENST00000351948 SNX4O95219 450 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 SNAP29O95721 258 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 FGF4P08620 206 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 KCNC4Q03721 635 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 HYAL1Q12794 435 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 LIN52Q52LA3 116 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 CES4AQ5XG92 561 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 UBE2J2Q8N2K1 259 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR9A4Q8NGU2 314 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 STON2Q8WXE9 905 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 DGCR14Q96DF8 476 aaKnown RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 VAPAQ9P0L0 249 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 CHST10O43529 356 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ZNF3P17036 446 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 DNASE1L1P49184 302 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 VLDLRP98155 873 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 KIR2DS3Q14952 304 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ARHGAP9Q9BRR9 750 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 TIMM29Q9BSF4 260 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 DOHHQ9BU89 302 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 CKLFQ9UBR5 152 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 BTBD3Q9Y2F9 522 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 E2F3O00716 465 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 METAP1P53582 386 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 GALNT1Q10472 559 aaPredicted RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 TUBB3Q13509 450 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 EXOC3L2Q2M3D2 409 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 PDPRQ8NCN5 879 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 KCNS3Q9BQ31 491 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 CRB3Q9BUF7 120 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 NPIPA5E9PKD4 350 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 TFECO14948 347 aaPredicted RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 VILLO15195 856 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 IDH3BO43837 385 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 NDUFV2P19404 249 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ADPRHP54922 357 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 RPS15P62841 145 aaKnown RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 PPP2R2BQ00005 443 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 FADDQ13158 208 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 DCTN2Q13561 401 aaKnown RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 TCTE1Q5JU00 501 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 CD300LGQ6UXG3 332 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 GALNT7Q86SF2 657 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR6N1Q8NGY5 312 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR2AJ1Q8NGZ0 328 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 OR5K2Q8NHB8 316 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 ECHDC3Q96DC8 303 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 LPAR4Q99677 370 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 MALT1Q9UDY8 824 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 PTBP2Q9UKA9 531 aaKnown RBP13.04□□□□□ -0.32
SMC6-201ENST00000351948 NPIPA1Q9UND3 350 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
SMC6-201ENST00000351948 SMIM30A4D0T7 59 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 EFCAB9A8MZ26 197 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 TACR1P25103 407 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 ARSFP54793 590 aa13.03□□□□□ -0.32
SMC6-201ENST00000351948 MAT1AQ00266 395 aaKnown RBP13.03□□□□□ -0.32
SMC6-201ENST00000351948 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms