RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SCGNO76038 276 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 S100A6P06703 90 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 BMP2P12643 396 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 NAA10P41227 235 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.31■□□□□ 0.047e-7■■□□□ 12.2
PTPN11-201ENST00000351677 C12orf40Q86WS4 652 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 CHCHD4Q8N4Q1 142 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SAMD12Q8N8I0 201 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 AVL9Q8NBF6 648 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SUN3Q8TAQ9 357 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 FXYD6Q9H0Q3 95 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 DKK3Q9UBP4 350 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 KIAA0513O60268 411 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 PRH1P02810 166 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 ABCA11PQ4W5N1 156 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 LRRC25Q8N386 305 aaPredicted RBP15.31■□□□□ 0.04
PTPN11-201ENST00000351677 TMEM156Q8N614 296 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 PSD4Q8NDX1 1056 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 HSPA12BQ96MM6 686 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 CCDC115Q96NT0 180 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 RMI1Q9H9A7 625 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 EXTL2Q9UBQ6 330 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 OR2AT4A6NND4 320 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 FGF4P08620 206 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 GPR4P46093 362 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 IRF5Q13568 498 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 TAS1R1Q7RTX1 841 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SCML4Q8N228 414 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 LRRC20Q8TCA0 184 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 NSMAFQ92636 917 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SMARCD2Q92925 531 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 SLC2A4RGQ9NR83 387 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF878C9JN71 531 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 FLRT2O43155 660 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 CSTAP01040 98 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF45Q02386 682 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 TMEM125Q96AQ2 219 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 TMEM19Q96HH6 336 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 LRR1Q96L50 414 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 PTCHD1Q96NR3 888 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 SLC29A1Q99808 456 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 MVB12BQ9H7P6 319 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 TREX1Q9NSU2 369 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 FARSAQ9Y285 508 aaKnown RBP15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ATF6P18850 670 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 STOMP27105 288 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 GCGRP47871 477 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 MAB21L1Q13394 359 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 RCAN2Q14206 197 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ZFP41Q8N8Y5 198 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 S100A16Q96FQ6 103 aaKnown RBP15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ORAI3Q9BRQ5 295 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 SLC2A11Q9BYW1 496 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 CDH10Q9Y6N8 788 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 GPX3P22352 226 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 FIGNL1Q6PIW4 674 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ZNF550Q7Z398 422 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 NAGSQ8N159 534 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 SUN5Q8TC36 379 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 MNTQ99583 582 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 SMURF1Q9HCE7 757 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 TSPAN4O14817 238 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 OXTRP30559 389 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 CST6Q15828 149 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 RPS26P11Q5JNZ5 115 aaPredicted RBP15.3■□□□□ 0.04
PTPN11-201ENST00000351677 GPR26Q8NDV2 337 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 CIDECQ96AQ7 238 aaPredicted RBP15.3■□□□□ 0.04
PTPN11-201ENST00000351677 SFXN1Q9H9B4 322 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 C12orf4Q9NQ89 552 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 HCN2Q9UL51 889 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 HCRTR2O43614 444 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 ADRB3P13945 408 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 HK3P52790 923 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 MANEALQ5VSG8 457 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 UBE2Q1Q7Z7E8 422 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 C3orf30Q96M34 536 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 TMEM181Q9P2C4 612 aa15.3■□□□□ 0.04
PTPN11-201ENST00000351677 CD8B2A6NJW9 211 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 CD8BP10966 210 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 SLC5A8Q8N695 610 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 OR8J1Q8NGP2 316 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 UTP4Q969X6 686 aaKnown RBP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 TMIGD2Q96BF3 282 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 KDM4BO94953 1096 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PLGP00747 810 aaPredicted RBP15.29■□□□□ 0.04
PTPN11-201ENST00000351677 VAMP1P23763 118 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 SPHARQ15513 63 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 GRHL2Q6ISB3 625 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 FOXRED2Q8IWF2 684 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 MFSD2AQ8NA29 543 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 TAS2R10Q9NYW0 307 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 LIPT1Q9Y234 373 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PLD2O14939 933 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 HCKP08631 526 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 ITGA5P08648 1049 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 PRKCDQ05655 676 aa15.29■□□□□ 0.04
PTPN11-201ENST00000351677 SEC23BQ15437 767 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms