RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 TBC1D3KA0A087X1G2 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 A0A1W2PPV9 198 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3FA6NER0 549 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3LB9A6J9 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TNFRSF11BO00300 401 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 FOXE1O00358 373 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-202ENST00000347849 PRMT3O60678 531 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 APOA1P02647 267 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3HP0C7X1 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TNFRSF1BP20333 461 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 UGT2B15P54855 530 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 DEFA1P59665 94 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 DEFA3P59666 94 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 SPANXN2Q5MJ10 180 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 CPTPQ5TA50 214 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3GQ6DHY5 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3CQ6IPX1 549 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 FAM180BQ6P0A1 224 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 FAM20CQ8IXL6 584 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TBC1D3Q8IZP1 549 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-202ENST00000347849 CYP4Z2PQ8N1L4 340 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 SYNPOQ8N3V7 929 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 KCNS3Q9BQ31 491 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 USP34Q70CQ2 3546 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 FEZF1A0PJY2 475 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 M0R129 80 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 SLC35G4P0C7Q5 338 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 ERGP11308 486 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 C21orf58P58505 322 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TFF2Q03403 129 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 GAB1Q13480 694 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 KRR1Q13601 381 aaKnown RBP20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TP53BP2Q13625 1128 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TMIGD1Q6UXZ0 262 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 MSANTD1Q6ZTZ1 278 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 ANKRD53Q8N9V6 530 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 REPS1Q96D71 796 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 MSLNLQ96KJ4 702 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 C12orf66Q96MD2 445 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 COL21A1Q96P44 957 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 NDEL1Q9GZM8 345 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 ADPRHL2Q9NX46 363 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 ERVK13-1Q9NX77 482 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 TAS2R16Q9NYV7 291 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 CCDC59Q9P031 241 aaKnown RBP20.24■□□□□ 0.83
PTPN18-202ENST00000347849 RAPGEFL1Q9UHV5 662 aa20.24■□□□□ 0.83
PTPN18-202ENST00000347849 OR52A4PA6NMU1 304 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 CTDSP2O14595 271 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 KRT75O95678 551 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 KLK1P06870 262 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 CASP9P55211 416 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 FOXD4Q12950 439 aaPredicted RBP20.23■□□□□ 0.83
PTPN18-202ENST00000347849 VEZF1Q14119 521 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 MLIPQ5VWP3 458 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 LCTLQ6UWM7 567 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 SETD7Q8WTS6 366 aaKnown RBP20.23■□□□□ 0.83
PTPN18-202ENST00000347849 ROGDIQ9GZN7 287 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 PHPT1Q9NRX4 125 aaPredicted RBP20.23■□□□□ 0.83
PTPN18-202ENST00000347849 FKBP14Q9NWM8 211 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 ZNF226Q9NYT6 803 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 MKLN1Q9UL63 735 aa20.23■□□□□ 0.83
PTPN18-202ENST00000347849 ANHXE9PGG2 379 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 H7BY64 318 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 ZW10O43264 779 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 CLDN2P57739 230 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 MPEG1Q2M385 716 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 AGAP6Q5VW22 663 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 HIST2H2AA3Q6FI13 130 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 TSEN54Q7Z6J9 526 aaKnown RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 PRAP1Q96NZ9 151 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 AGAP4Q96P64 663 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 FERD3LQ96RJ6 166 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 IMP3Q9NV31 184 aaKnown RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 FAM120CQ9NX05 1096 aaKnown RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 PCDHB11Q9Y5F2 797 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 LYVE1Q9Y5Y7 322 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 POM121BA6NF01 834 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 PDZK1P1A8MUH7 402 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 RTCAO00442 366 aaKnown RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 KIAA0513O60268 411 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 ABCB1P08183 1280 aaPredicted RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 OR2B6P58173 313 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 FBXO43Q4G163 708 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 GPR155Q7Z3F1 870 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 CIDECQ96AQ7 238 aaPredicted RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 FAM131CQ96AQ9 280 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 METTL2AQ96IZ6 378 aaKnown RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 NIPSNAP1Q9BPW8 284 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 DOHHQ9BU89 302 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 BTBD1Q9H0C5 482 aa20.22■□□□□ 0.83
PTPN18-202ENST00000347849 MN1Q10571 1320 aaPredicted RBP20.22■□□□□ 0.83
PTPN18-202ENST00000347849 PNMA8CA0A1B0GUJ8 204 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 H0Y8X5 98 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 OPN1SWP03999 348 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 OR1E2P47887 323 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 C10orf62Q5T681 223 aaPredicted RBP20.21■□□□□ 0.83
PTPN18-202ENST00000347849 ZNF852Q6ZMS4 543 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 MTSS1LQ765P7 747 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 OR10G2Q8NGC3 310 aa20.21■□□□□ 0.83
PTPN18-202ENST00000347849 COQ8BQ96D53 544 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms