RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 PCDH1Q08174 1060 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 ZNF234Q14588 700 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 KIAA1958Q8N8K9 716 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 FAM46DQ8NEK8 389 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 CXorf40AQ8TE69 158 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 UCK2Q9BZX2 261 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 POLR2J3Q9H1A7 115 aaKnown RBP18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 MARCH7Q9H992 704 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 PCDHGA3Q9Y5H0 932 aa18.15■□□□□ 0.5
LYSMD4-202ENST00000344791 HEPACAM2A8MVW5 462 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 MFN2O95140 757 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 NTN1O95631 604 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 CCT3P49368 545 aaKnown RBP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 SPANXN2Q5MJ10 180 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 PLAG1Q6DJT9 500 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 OR8H2Q8N162 312 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 SLC7A13Q8TCU3 470 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 PDXPQ96GD0 296 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 AHSPQ9NZD4 102 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 MYO9BQ13459 2157 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 TBC1D3BA6NDS4 549 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 TMEM221A6NGB7 291 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 IGLON5A6NGN9 336 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 CCRL2O00421 344 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 TLX2O43763 284 aaPredicted RBP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 MED26O95402 600 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 SRPRAP08240 638 aaKnown RBP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 CD72P21854 359 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 ITGB7P26010 798 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 DDX6P26196 483 aaKnown RBP eCLIP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 BSGP35613 385 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 UGT2B10P36537 528 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 XKP51811 444 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 HEPACAMQ14CZ8 416 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 CASP12Q6UXS9 341 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 CELF2-AS1Q8N7Q2 184 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 JPH3Q8WXH2 748 aaPredicted RBP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 UBE2E3Q969T4 207 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 MAPKAP1Q9BPZ7 522 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 SERHL2Q9H4I8 314 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 SNTG1Q9NSN8 517 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 IMP3Q9NV31 184 aaKnown RBP18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 KLHL20Q9Y2M5 609 aa18.14■□□□□ 0.49
LYSMD4-202ENST00000344791 A0A1W2PS29 197 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 NR2F1P10589 423 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 KELP23276 732 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SOX6P35712 828 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 EPHA5P54756 1037 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 HNRNPA1L2Q32P51 320 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ZNF770Q6IQ21 691 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 Q8N9G6 341 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 FBXO15Q8NCQ5 510 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 TREX2Q9BQ50 279 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 AIF1LQ9BQI0 150 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 DEC1Q9P2X7 70 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 KIAA1671Q9BY89 1806 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 EFCAB10A6NFE3 127 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 FRS3O43559 492 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 H1F0P07305 194 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SELENBP1Q13228 472 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 FBXO43Q4G163 708 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 MLIPQ5VWP3 458 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 LIPKQ5VXJ0 399 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 LINC00299Q6ZSB3 139 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 PDZD3Q86UT5 571 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 DCUN1D3Q8IWE4 304 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SMPDL3AQ92484 453 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 NEURL3Q96EH8 262 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 TRMT61AQ96FX7 289 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 EPHX3Q9H6B9 360 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 EQTNQ9NQ60 294 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ZCCHC3Q9NUD5 404 aaKnown RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 MYO15AQ9UKN7 3530 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ALPK3Q96L96 1907 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 PRAMEF27A3QJZ7 478 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 LOC110117498-PIK3R3F6TDL0 507 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 PSMD11O00231 422 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 CAPN5O15484 640 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ACP5P13686 325 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 BUD31P41223 144 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 P2RY2P41231 377 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SSR2P43308 183 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 OLR1P78380 273 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ZMAT1Q5H9K5 638 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SAXO2Q658L1 398 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 OPALINQ96PE5 141 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 MS4A8Q9BY19 250 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 OR51I1Q9H343 314 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 DPEP2Q9H4A9 486 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 LHX9Q9NQ69 397 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 SIRT3Q9NTG7 399 aaPredicted RBP18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 MARK1Q9P0L2 795 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 CARD8Q9Y2G2 431 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 PCDHGB6Q9Y5F9 930 aa18.13■□□□□ 0.49
LYSMD4-202ENST00000344791 ADH1CP00326 375 aa18.12■□□□□ 0.49
LYSMD4-202ENST00000344791 PXNP49023 591 aaPredicted RBP18.12■□□□□ 0.49
LYSMD4-202ENST00000344791 HMGA2P52926 109 aa18.12■□□□□ 0.49
LYSMD4-202ENST00000344791 ELAVL3Q14576 367 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms