RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 ITPAQ9BY32 194 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 A4GALTQ9NPC4 353 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 OBP2AQ9NY56 170 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 ACSL5Q9ULC5 683 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 DUSP12Q9UNI6 340 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 F5P12259 2224 aa18.36■□□□□ 0.53
COL9A3-201ENST00000343916 CLDN25C9JDP6 229 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 ANHXE9PGG2 379 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 M0R082 166 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 MRPS14O60783 128 aaKnown RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 ALPPL2P10696 532 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 PBX2P40425 430 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 CSNK2BP67870 215 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 NDUFAF5Q5TEU4 345 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 OR4C11Q6IEV9 310 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 CREB3L4Q8TEY5 395 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 JPH3Q8WXH2 748 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 DPH7Q9BTV6 452 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 MKRN2Q9H000 416 aaKnown RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 ZBTB20Q9HC78 741 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 TAS2R16Q9NYV7 291 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 PRAMEF27A3QJZ7 478 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 LRIT2A6NDA9 550 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 C4orf51C9J302 202 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 CDK1P06493 297 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 OR12D1P0DN82 309 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 GDI1P31150 447 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 FRKP42685 505 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 SYPL1Q16563 259 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 KIAA1161Q6NSJ0 714 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 DEF8Q6ZN54 512 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 OR4D11Q8NGI4 311 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 QRFPRQ96P65 431 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 BCL7BQ9BQE9 202 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 PLCXD1Q9NUJ7 323 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 MS4A12Q9NXJ0 267 aa18.35■□□□□ 0.53
COL9A3-201ENST00000343916 YBX2Q9Y2T7 364 aaKnown RBP18.35■□□□□ 0.53
COL9A3-201ENST00000343916 APODP05090 189 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 CHMP24386 653 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 BCL6P41182 706 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 RAB28P51157 221 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 KRT33BQ14525 404 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 SEC23BQ15437 767 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 DGUOKQ16854 277 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 TCTN3Q6NUS6 607 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 ADCK1Q86TW2 530 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 OR14C36Q8NHC7 312 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 XAGE5Q8WWM1 108 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 FGF14Q92915 247 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 MYDGFQ969H8 173 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 GLIPR2Q9H4G4 154 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 DDX31Q9H8H2 851 aaKnown RBP18.34■□□□□ 0.53
COL9A3-201ENST00000343916 PHPT1Q9NRX4 125 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-201ENST00000343916 B3GNT3Q9Y2A9 372 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 KLHL20Q9Y2M5 609 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 A0A0A6YYD5 115 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 KRBA1A5PL33 1030 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 PDZK1P1A8MUH7 402 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 EFCAB9A8MZ26 197 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 CEACAM5P06731 702 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 C5AR1P21730 350 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 CRISP3P54108 245 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 ST3GAL4Q11206 333 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 TIGD6Q17RP2 521 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 ZNF750Q32MQ0 723 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 COLEC12Q5KU26 742 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 ZNF770Q6IQ21 691 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-201ENST00000343916 LACC1Q8IV20 430 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 SLC30A8Q8IWU4 369 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 DEPDC4Q8N2C3 294 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 OR52E1Q8NGJ3 308 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 COL21A1Q96P44 957 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 BTBD2Q9BX70 525 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 AKIP1Q9NQ31 210 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 FKBP14Q9NWM8 211 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 KCND3Q9UK17 655 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 GPSM3Q9Y4H4 160 aa18.34■□□□□ 0.53
COL9A3-201ENST00000343916 TMEM247A6NEH6 219 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 SLC28A2O43868 658 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 TBX19O60806 448 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 SOX14O95416 240 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 IGFBP1P08833 259 aaPredicted RBP18.33■□□□□ 0.53
COL9A3-201ENST00000343916 GPC1P35052 558 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 FEN1P39748 380 aaKnown RBP18.33■□□□□ 0.53
COL9A3-201ENST00000343916 ERVK-21P61565 698 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 SGCGQ13326 291 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 TBCEQ15813 527 aaPredicted RBP18.33■□□□□ 0.53
COL9A3-201ENST00000343916 MLIPQ5VWP3 458 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 PARM1Q6UWI2 310 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 COMTD1Q86VU5 262 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 STX19Q8N4C7 294 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 RAB42Q8N4Z0 105 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 DENND6BQ8NEG7 585 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 SLC38A4Q969I6 547 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 TREX2Q9BQ50 279 aaPredicted RBP18.33■□□□□ 0.53
COL9A3-201ENST00000343916 YIPF4Q9BSR8 244 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 FBXL12Q9NXK8 326 aa18.33■□□□□ 0.53
COL9A3-201ENST00000343916 A8MVJ9 347 aa18.33■□□□□ 0.52
COL9A3-201ENST00000343916 PTHP01270 115 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms