RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FAM180BQ6P0A1 224 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 RHBDD1Q8TEB9 315 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 GIPC3Q8TF64 312 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 TUBA1CQ9BQE3 449 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 DUSP26Q9BV47 211 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SPRTNQ9H040 489 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF768Q9H5H4 540 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 C5AR2Q9P296 337 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 CROTQ9UKG9 612 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MAN2B2Q9Y2E5 1009 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 WBP11Q9Y2W2 641 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 TOX3O15405 576 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 PROM1O43490 865 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 FOXS1O43638 330 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 GALR3O60755 368 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 CKMT2P17540 419 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 GPR19Q15760 415 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 CPTPQ5TA50 214 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 NDUFAF5Q5TEU4 345 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 C18orf63Q68DL7 685 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 PRMT9Q6P2P2 845 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 CLVS1Q8IUQ0 354 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 CLECL1Q8IZS7 167 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 OR4D9Q8NGE8 314 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 SNRNP27Q8WVK2 155 aaKnown RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 LRTOMTQ8WZ04 291 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 CIDECQ96AQ7 238 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 MTERF3Q96E29 417 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 PAIP1Q9H074 479 aaKnown RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 VAPAQ9P0L0 249 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 SH3BP4Q9P0V3 963 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 GMPR2Q9P2T1 348 aaKnown RBP13.88□□□□□ -0.19
CXCL12-201ENST00000343575 SNX13Q9Y5W8 968 aa13.88□□□□□ -0.19
CXCL12-201ENST00000343575 MYOCOSA0A1B0GUC4 107 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 FITM1A5D6W6 292 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 URADA6NGE7 173 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF860A6NHJ4 632 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TRIM64BA6NI03 449 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 SEC16AO15027 2179 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PGRMC2O15173 223 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TBX19O60806 448 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NOL3O60936 208 aaKnown RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 LDOC1O95751 146 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 AIFM1O95831 613 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ANKRD34CP0C6C1 535 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ACP1P24666 158 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 DCKP27707 260 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 HPCAL1P37235 193 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 GSTM5P46439 218 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 GCGRP47871 477 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ENTPD1P49961 510 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 DUSP3P51452 185 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 OLR1P78380 273 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 RABL3Q5HYI8 236 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 LRIF1Q5T3J3 769 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NANOGP8Q6NSW7 305 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ABHD13Q7L211 337 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ERMP1Q7Z2K6 904 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 KMT5CQ86Y97 462 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 SLC15A3Q8IY34 581 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 COL27A1Q8IZC6 1860 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ZNF655Q8N720 491 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 RCBTB1Q8NDN9 531 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 DNAJB14Q8TBM8 379 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 STARD8Q92502 1023 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TMIGD2Q96BF3 282 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 C12orf43Q96C57 262 aaKnown RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 SERINC2Q96SA4 455 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 EDEM2Q9BV94 578 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NANOGQ9H9S0 305 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 FAM120CQ9NX05 1096 aaKnown RBP13.87□□□□□ -0.19
CXCL12-201ENST00000343575 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TMEM181Q9P2C4 612 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 ABCD2Q9UBJ2 740 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 CD300AQ9UGN4 299 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 FBXW2Q9UKT8 454 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 CES1P1Q9UKY3 287 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 MAPRE3Q9UPY8 281 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PCDHB14Q9Y5E9 798 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PCDHA9Q9Y5H5 950 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 GLOD5A6NK44 160 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 AQP12BA6NM10 295 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NME4O00746 187 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NPPAP01160 153 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 MSL3P1P0C860 447 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 NBL1P41271 181 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 LIM2P55344 173 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 TGM3Q08188 693 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 SELPLGQ14242 412 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 HEPACAMQ14CZ8 416 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 MOGQ16653 247 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 PRAMEF17Q5VTA0 474 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 MSANTD1Q6ZTZ1 278 aa13.87□□□□□ -0.19
CXCL12-201ENST00000343575 DHFR2Q86XF0 187 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms