RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PPP1R32Q7Z5V6 425 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.68□□□□□ -0.86
TPM3-207ENST00000341372 TMEM151AQ8N4L1 468 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MOCOSQ96EN8 888 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MMABQ96EY8 250 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 SMIM10Q96HG1 83 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 PTCHD1Q96NR3 888 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MACROD1Q9BQ69 325 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MRPL57Q9BQC6 102 aaKnown RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 CCDC77Q9BR77 488 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SEMA4CQ9C0C4 833 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MKKSQ9NPJ1 570 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 AP5S1Q9NUS5 200 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 OPTCQ9UBM4 332 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SCN3AQ9NY46 2000 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 HMX3A6NHT5 357 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 FOXO6A8MYZ6 492 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 STX16-NPEPL1H3BU86 382 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 STX16O14662 325 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 C1QL1O75973 258 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 WFS1O76024 890 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 IGHEP01854 428 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 CYC1P08574 325 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 ITGA5P08648 1049 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 SBK3P0C264 359 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 ZGLP1P0C6A0 271 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 SFTPCP11686 197 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 GFAPP14136 432 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 PORP16435 677 aaPredicted RBP9.67□□□□□ -0.86
TPM3-207ENST00000341372 IL1RNP18510 177 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 ATP1A4Q13733 1029 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 DOC2AQ14183 400 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 LY6DQ14210 128 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 MYBPC3Q14896 1274 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 HERC3Q15034 1050 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 AGBL2Q5U5Z8 902 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 NIPAL1Q6NVV3 410 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 TMIGD1Q6UXZ0 262 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 PDSS2Q86YH6 399 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 SNX31Q8N9S9 440 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 OR9A4Q8NGU2 314 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 MGARPQ8TDB4 240 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 FOXRED1Q96CU9 486 aaPredicted RBP9.67□□□□□ -0.86
TPM3-207ENST00000341372 AICDAQ9GZX7 198 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 MRPL46Q9H2W6 279 aaKnown RBP9.67□□□□□ -0.86
TPM3-207ENST00000341372 RHBGQ9H310 441 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 SEMA3GQ9NS98 782 aa9.67□□□□□ -0.86
TPM3-207ENST00000341372 FAM90A27PA6NNH2 459 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 E2F3O00716 465 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 SOCS6O14544 535 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ASNA1O43681 348 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 GALR3O60755 368 aaPredicted RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 CEACAM4O75871 244 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 KLHL18O94889 574 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ZNF205O95201 554 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 TBX6O95947 436 aaPredicted RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 MYZAPP0CAP1 466 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 SDHAP31040 664 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 PIK3CGP48736 1102 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 OCA2Q04671 838 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 KLC1Q07866 573 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 CHIT1Q13231 466 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 RBBP5Q15291 538 aaKnown RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 ADPRMQ3LIE5 342 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 KRT71Q3SY84 523 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 GRHL2Q6ISB3 625 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 SH2D5Q6ZV89 423 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 MED25Q71SY5 747 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 GALNTL5Q7Z4T8 443 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 LAS2Q8IYD9 372 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ZCCHC10Q8TBK6 192 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 UTP15Q8TED0 518 aaKnown RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 MIEF2Q96C03 454 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 PGM2Q96G03 612 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 COG8Q96MW5 612 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 C1QTNF3Q9BXJ4 246 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 ANKHQ9HCJ1 492 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 TRPC4Q9UBN4 977 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ZNF490Q9ULM2 529 aaPredicted RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 HS3ST3B1Q9Y662 390 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 URADA6NGE7 173 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 C4orf51C9J302 202 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 PCDH17O14917 1159 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 UGDHO60701 494 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 GSTA1P08263 222 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 OTX2P32243 289 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 SLCO1A2P46721 670 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 RRADP55042 308 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 VAMP2P63027 116 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 IRF8Q02556 426 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 VWA2Q5GFL6 755 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 XKR6Q5GH73 641 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 PAGE2BQ5JRK9 111 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 ABHD13Q7L211 337 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 PTGR2Q8N8N7 351 aaPredicted RBP9.66□□□□□ -0.86
TPM3-207ENST00000341372 ING2Q9H160 280 aa9.66□□□□□ -0.86
TPM3-207ENST00000341372 MLXIPLQ9NP71 852 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms